BLASTX nr result

ID: Panax21_contig00034265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034265
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ri...   202   1e-92
ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-91
ref|XP_004147531.1| PREDICTED: short-chain type dehydrogenase/re...   176   1e-83
ref|XP_004171304.1| PREDICTED: LOW QUALITY PROTEIN: short-chain ...   176   4e-83
ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ri...   172   1e-79

>ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535254|gb|EEF36931.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  202 bits (515), Expect(2) = 1e-92
 Identities = 95/131 (72%), Positives = 117/131 (89%)
 Frame = -3

Query: 712 GIGRAITLHLRSLGAKLVINYASNSDQANILASELNSATNYSNPIAVTIQADVSDPDQVK 533
           GIGRAI++HL SLGAK+V+NYAS+S QA+ LASELN++ + S+P AV I+ADVSDPDQVK
Sbjct: 29  GIGRAISIHLHSLGAKVVLNYASSSTQADHLASELNASASASHPHAVAIKADVSDPDQVK 88

Query: 532 LVFDKSEQEFGTQAHILINCAGILDAKYPTIANTTVEDWDATFNVNTKGAFLCCREAANM 353
            +FD++EQEFG++ HIL+NCAG++D KYP++ANTTVEDWD TFNVN KGAFLCCREAAN 
Sbjct: 89  QLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDMTFNVNAKGAFLCCREAANR 148

Query: 352 LARGGGGRIIL 320
           LA GGGGRII+
Sbjct: 149 LASGGGGRIIM 159



 Score =  164 bits (414), Expect(2) = 1e-92
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = -1

Query: 324 Y*AYVASKAAVEAMAKIVAKDLKGSGITANCVAPGPVATELFFAGKTEETIKRLTDACPL 145
           Y AY ASKAAVE M KI+AK+LKG+GITANCVAPGPVATELFFAGKTEETIKR+ D+CPL
Sbjct: 172 YAAYAASKAAVETMTKILAKELKGTGITANCVAPGPVATELFFAGKTEETIKRIADSCPL 231

Query: 144 GRLGEPDDVARIVGFLATDAGEWINGQIIRANGG 43
           GRLGEP D++ IVGFLA+DAGEWINGQ+IR NGG
Sbjct: 232 GRLGEPKDISEIVGFLASDAGEWINGQVIRVNGG 265


>ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|222857541|gb|EEE95088.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  198 bits (504), Expect(2) = 4e-91
 Identities = 93/131 (70%), Positives = 115/131 (87%)
 Frame = -3

Query: 712 GIGRAITLHLRSLGAKLVINYASNSDQANILASELNSATNYSNPIAVTIQADVSDPDQVK 533
           GIGRAI++HL SLGA++VINYASNS+QA++LASELN++   S+P A+ I+ADVSDPDQVK
Sbjct: 29  GIGRAISIHLHSLGARVVINYASNSNQADLLASELNASAPSSHPQAIAIKADVSDPDQVK 88

Query: 532 LVFDKSEQEFGTQAHILINCAGILDAKYPTIANTTVEDWDATFNVNTKGAFLCCREAANM 353
            +F ++E+EFG++ HIL +CAG+LD KYP +ANTTVEDWD TFNVNTKGAFLCCREA N 
Sbjct: 89  QLFSRTEEEFGSKIHILAHCAGVLDPKYPILANTTVEDWDMTFNVNTKGAFLCCREATNR 148

Query: 352 LARGGGGRIIL 320
           LA GGGGRII+
Sbjct: 149 LAYGGGGRIIM 159



 Score =  162 bits (411), Expect(2) = 4e-91
 Identities = 74/94 (78%), Positives = 87/94 (92%)
 Frame = -1

Query: 324 Y*AYVASKAAVEAMAKIVAKDLKGSGITANCVAPGPVATELFFAGKTEETIKRLTDACPL 145
           Y AY ASKAAVE M +IVAK+LKG+GITANCVAPGPVATELFFAGKTEET+KR+ DACPL
Sbjct: 172 YAAYTASKAAVETMTRIVAKELKGTGITANCVAPGPVATELFFAGKTEETLKRIADACPL 231

Query: 144 GRLGEPDDVARIVGFLATDAGEWINGQIIRANGG 43
            RLGEP+D++++VGF+A+DAGEWINGQ+IR NGG
Sbjct: 232 NRLGEPEDISKVVGFIASDAGEWINGQVIRVNGG 265


>ref|XP_004147531.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Cucumis
           sativus]
          Length = 258

 Score =  176 bits (447), Expect(2) = 1e-83
 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
 Frame = -3

Query: 712 GIGRAITLHLRSLGAKLVINYASNSDQANILASELNSATNYSNPI--AVTIQADVSDPDQ 539
           GIGRAI +HL SLGA LV+NYASNS QA++LASELN +   S P+  AV +QADVSDPD 
Sbjct: 20  GIGRAIAIHLHSLGANLVLNYASNSTQADLLASELNQS---SAPLRRAVAVQADVSDPDH 76

Query: 538 VKLVFDKSEQEFGTQAHILINCAGILDAKYPTIANTTVEDWDATFNVNTKGAFLCCREAA 359
           VK +FD +E+EFG++ HIL+N AGILD+KYP++  TTVEDWD TF VN +GAFL C+EA 
Sbjct: 77  VKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLVETTVEDWDETFRVNCRGAFLVCKEAE 136

Query: 358 NMLARGGGGRIIL 320
           N + RGGGGRI+L
Sbjct: 137 NRIKRGGGGRIVL 149



 Score =  160 bits (404), Expect(2) = 1e-83
 Identities = 71/94 (75%), Positives = 86/94 (91%)
 Frame = -1

Query: 324 Y*AYVASKAAVEAMAKIVAKDLKGSGITANCVAPGPVATELFFAGKTEETIKRLTDACPL 145
           Y AY ASKAAVEAMAKI AK+LKG+GIT NCVAPGPVATELF+AGK+EET+ R+ +ACP+
Sbjct: 162 YGAYAASKAAVEAMAKIAAKELKGTGITVNCVAPGPVATELFYAGKSEETVARMAEACPM 221

Query: 144 GRLGEPDDVARIVGFLATDAGEWINGQIIRANGG 43
           GRLG+PDD+A++VGFL TDAGEW+NGQ++R NGG
Sbjct: 222 GRLGQPDDLAKVVGFLVTDAGEWVNGQVVRVNGG 255


>ref|XP_004171304.1| PREDICTED: LOW QUALITY PROTEIN: short-chain type
           dehydrogenase/reductase-like [Cucumis sativus]
          Length = 258

 Score =  176 bits (447), Expect(2) = 4e-83
 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
 Frame = -3

Query: 712 GIGRAITLHLRSLGAKLVINYASNSDQANILASELNSATNYSNPI--AVTIQADVSDPDQ 539
           GIGRAI +HL SLGA LV+NYASNS QA++LASELN +   S P+  AV +QADVSDPD 
Sbjct: 20  GIGRAIAIHLHSLGANLVLNYASNSTQADLLASELNQS---SAPLRRAVAVQADVSDPDH 76

Query: 538 VKLVFDKSEQEFGTQAHILINCAGILDAKYPTIANTTVEDWDATFNVNTKGAFLCCREAA 359
           VK +FD +E+EFG++ HIL+N AGILD+KYP++  TTVEDWD TF VN +GAFL C+EA 
Sbjct: 77  VKRLFDSAEKEFGSEIHILVNSAGILDSKYPSLVETTVEDWDETFRVNCRGAFLVCKEAE 136

Query: 358 NMLARGGGGRIIL 320
           N + RGGGGRI+L
Sbjct: 137 NRIKRGGGGRIVL 149



 Score =  158 bits (399), Expect(2) = 4e-83
 Identities = 70/94 (74%), Positives = 85/94 (90%)
 Frame = -1

Query: 324 Y*AYVASKAAVEAMAKIVAKDLKGSGITANCVAPGPVATELFFAGKTEETIKRLTDACPL 145
           Y AY ASKAAVEAMAKI AK+LKG+GIT NCVAPGPVATE F+AGK+EET+ R+ +ACP+
Sbjct: 162 YGAYAASKAAVEAMAKIAAKELKGTGITVNCVAPGPVATEXFYAGKSEETVARMAEACPM 221

Query: 144 GRLGEPDDVARIVGFLATDAGEWINGQIIRANGG 43
           GRLG+PDD+A++VGFL TDAGEW+NGQ++R NGG
Sbjct: 222 GRLGQPDDLAKVVGFLVTDAGEWVNGQVVRVNGG 255


>ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535255|gb|EEF36932.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  172 bits (436), Expect(2) = 1e-79
 Identities = 77/131 (58%), Positives = 109/131 (83%)
 Frame = -3

Query: 712 GIGRAITLHLRSLGAKLVINYASNSDQANILASELNSATNYSNPIAVTIQADVSDPDQVK 533
           GIG+AI LHL SLGAKLVINY+SN +QA+++A ++NS++   +P A+ +QA+VSDP  VK
Sbjct: 30  GIGKAIALHLASLGAKLVINYSSNKEQADLVARDVNSSSEKDSPRAIAVQANVSDPTHVK 89

Query: 532 LVFDKSEQEFGTQAHILINCAGILDAKYPTIANTTVEDWDATFNVNTKGAFLCCREAANM 353
            +FD++E+ FG Q H+ +N AG LD+KYP+IA+T++E +D TF++NT+GAFLCC+EAAN 
Sbjct: 90  FLFDEAERVFGCQVHVFVNSAGTLDSKYPSIADTSLEGFDLTFSINTRGAFLCCKEAANR 149

Query: 352 LARGGGGRIIL 320
           L RGGGGRI++
Sbjct: 150 LKRGGGGRIVV 160



 Score =  150 bits (379), Expect(2) = 1e-79
 Identities = 70/92 (76%), Positives = 82/92 (89%)
 Frame = -1

Query: 318 AYVASKAAVEAMAKIVAKDLKGSGITANCVAPGPVATELFFAGKTEETIKRLTDACPLGR 139
           AY ASKAAVEAM KI+AK+LKG+GITANCVAPGP+AT+++F+GKTEE I+R    CPLGR
Sbjct: 175 AYAASKAAVEAMVKILAKELKGTGITANCVAPGPIATDMYFSGKTEEQIQRNIAECPLGR 234

Query: 138 LGEPDDVARIVGFLATDAGEWINGQIIRANGG 43
           LGEP DVA IVGFLATDA EW+NGQ++RANGG
Sbjct: 235 LGEPKDVAPIVGFLATDASEWVNGQVVRANGG 266


Top