BLASTX nr result
ID: Panax21_contig00034259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00034259
(734 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 71 4e-11
ref|XP_002510806.1| conserved hypothetical protein [Ricinus comm... 72 6e-11
ref|XP_003536472.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 70 4e-10
ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g4888... 67 5e-10
gb|AFK44482.1| unknown [Medicago truncatula] 70 6e-10
>ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Glycine max]
Length = 305
Score = 71.2 bits (173), Expect(2) = 4e-11
Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Frame = +2
Query: 101 DLLIKIFSKIDQDELLLDVSSVCLPWNSAVCE-LLFKGEPGTLNLTPIQRVNFGAFEYHM 277
D+L+KIF +D EL +S VC W A C+ LL+K TL+L+ + R NF + +
Sbjct: 17 DILVKIFQLLDIFELTSGISRVCSAWRMACCDPLLWK----TLDLSML-RSNF--IKIPL 69
Query: 278 KPKVLMS-----ILVKVMK-SYSCDGNDGFSSITKMVFPSRLCVLDRHLVYLAQRSNKLK 439
+P V + L +++K S S SI ++F L V D L Y A+R +L+
Sbjct: 70 EPFVYVDGRSDRTLTRILKISLSLSQQ----SIMTLIFHFNLYVSDEQLTYTAERCPQLR 125
Query: 440 RLFLAAPEELTGKGFSRAIRNWRGIEEMLLGPLDQVHLEHIIKEIGINCKNLEVL 604
RL L A + G +AIR W+ +E + + + + +I++EI +CKN L
Sbjct: 126 RLVLPAWNRIKKPGMCKAIRGWKELESLTMPSI--ANPPYILEEISTHCKNFSEL 178
Score = 22.3 bits (46), Expect(2) = 4e-11
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 58 EDDGTEVRKWEDL 96
ED+ + +R+WEDL
Sbjct: 2 EDNDSYIRRWEDL 14
>ref|XP_002510806.1| conserved hypothetical protein [Ricinus communis]
gi|223549921|gb|EEF51408.1| conserved hypothetical
protein [Ricinus communis]
Length = 316
Score = 72.4 bits (176), Expect(2) = 6e-11
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Frame = +2
Query: 101 DLLIKIFSKIDQDELLLDVSSVCLPWNSAVCE-LLFKGEPGTLNLTPIQRVNFGAFEYHM 277
D+L+KIF D +L ++ VC W A C+ LL+K TL+L+ ++ NF + +
Sbjct: 28 DILVKIFQSFDIFQLTSGIAHVCSSWRLACCDPLLWK----TLDLSMLKS-NF--IKIPL 80
Query: 278 KPKVLMS-----ILVKVMKSYSCDGNDGFSSITKMVFPSRLCVLDRHLVYLAQRSNKLKR 442
+P V + L +V+K S + + G +IT ++F L V D L Y A+R +L+R
Sbjct: 81 EPYVYVDGRSDKTLTRVLK-ISLNLSQG--NITSLIFHFNLYVSDEQLTYTAERCPRLRR 137
Query: 443 LFLAAPEELTGKGFSRAIRNWRGIEEMLLGPLDQVHLEHIIKEIGINCKNLEVL 604
L L A + G +AIR WR +E + + + + ++I+EI NC+N L
Sbjct: 138 LVLPAWNRIKKTGICKAIRMWRDLESLTMPSI--ANPPYLIEEIANNCRNFSEL 189
Score = 20.8 bits (42), Expect(2) = 6e-11
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 52 EGEDDGTEVRKWEDL 96
E E+ + VR+WEDL
Sbjct: 11 EMEEGDSLVRRWEDL 25
>ref|XP_003536472.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Glycine max]
Length = 304
Score = 70.1 bits (170), Expect(2) = 4e-10
Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Frame = +2
Query: 101 DLLIKIFSKIDQDELLLDVSSVCLPWNSAVCE-LLFKGEPGTLNLTPIQRVNFGAFEYHM 277
D+L+KIF +D EL +S VC W A C+ LL+K TL+L+ + R NF + +
Sbjct: 16 DILVKIFQLLDIFELTSGISRVCSAWRLACCDPLLWK----TLDLSML-RSNF--IKIPL 68
Query: 278 KPKVLMS-----ILVKVMK-SYSCDGNDGFSSITKMVFPSRLCVLDRHLVYLAQRSNKLK 439
+P V + L +++K S S SI ++F L V D L Y A+R +L+
Sbjct: 69 EPFVYVDGRSDRTLTRILKISLSLSQQ----SIMTLIFHFNLYVSDEQLTYTAERCPQLR 124
Query: 440 RLFLAAPEELTGKGFSRAIRNWRGIEEMLLGPLDQVHLEHIIKEIGINCKNLEVL 604
RL L A + G +AIR W+ +E + + + + +I++EI +CKN L
Sbjct: 125 RLVLPAWNRIKKPGMCKAIRGWKELESLTMPCI--ANPPYILEEISTHCKNFSEL 177
Score = 20.4 bits (41), Expect(2) = 4e-10
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 61 DDGTEVRKWEDL 96
+D +R+WEDL
Sbjct: 2 EDNDYIRRWEDL 13
>ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g48880 [Vitis vinifera]
gi|147841766|emb|CAN62210.1| hypothetical protein
VITISV_008091 [Vitis vinifera]
Length = 321
Score = 67.4 bits (163), Expect(2) = 5e-10
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Frame = +2
Query: 101 DLLIKIFSKIDQDELLLDVSSVCLPWNSAVCE-LLFKGEPGTLNLTPIQRVNFGAFEYHM 277
D+L+KIF D EL ++ VC W A C+ L+K TL+LT ++ + +
Sbjct: 28 DILVKIFQSFDIFELTSGIAHVCRVWRMAACDPFLWK----TLDLTKLES---HFIKIPL 80
Query: 278 KPKVLMS-----ILVKVMKSYSCDGNDGFSSITKMVFPSRLCVLDRHLVYLAQRSNKLKR 442
+P V +S L +++K S + + G +I ++F L + D L Y+A+R +L+R
Sbjct: 81 EPYVYVSDQSDKSLTRLLK-ISLNLSQG--NIRSLIFHFNLYLNDDQLTYIAERCPRLRR 137
Query: 443 LFLAAPEELTGKGFSRAIRNWRGIEEMLLGPLDQVHLEHIIKEIGINCKNLEVL 604
L L A + G +AIR W+ +E + + ++ + ++++EI NC N L
Sbjct: 138 LVLPAWNRIKKSGICKAIRMWKDLESLTMPSIE--NPPYLMEEISKNCNNFREL 189
Score = 22.7 bits (47), Expect(2) = 5e-10
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 52 EGEDDGTEVRKWEDL 96
E ED + VRKWED+
Sbjct: 11 EMEDGQSVVRKWEDM 25
>gb|AFK44482.1| unknown [Medicago truncatula]
Length = 305
Score = 69.7 bits (169), Expect = 6e-10
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +2
Query: 101 DLLIKIFSKIDQDELLLDVSSVCLPWNSAVCE-LLFKGEPGTLNLTPIQRVNFGAFEYHM 277
D+L+KIF +D EL ++ VC W A C+ LL+K TL+L+ + R NF + +
Sbjct: 17 DILVKIFQLLDIFELTSGIAHVCSAWRMACCDPLLWK----TLDLSML-RSNF--IKIPL 69
Query: 278 KPKVLMSILV--KVMKSYSCDGNDGFSSITKMVFPSRLCVLDRHLVYLAQRSNKLKRLFL 451
+P V + K+ + N SI ++F L V D L Y A+R LKRL L
Sbjct: 70 EPFVYVDERSDKKLTRLLKISLNLSRMSIVTLIFHFNLYVSDDQLTYTAERCPHLKRLVL 129
Query: 452 AAPEELTGKGFSRAIRNWRGIEEMLLGPLDQVHLEHIIKEIGINCKNLEVL 604
A + G +AIR W+ +E + + + + + ++EI NCKN L
Sbjct: 130 PAWNRIKRTGMCKAIRCWKELESLTMPSI--ANPPYFLEEIATNCKNFSEL 178