BLASTX nr result

ID: Panax21_contig00034258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034258
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38009.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002274813.1| PREDICTED: MATE efflux family protein 4, chl...   158   5e-37
ref|XP_002274783.1| PREDICTED: MATE efflux family protein 4, chl...   156   1e-36
ref|XP_002313018.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002878546.1| hypothetical protein ARALYDRAFT_480999 [Arab...   146   2e-33

>emb|CBI38009.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  158 bits (399), Expect = 5e-37
 Identities = 85/143 (59%), Positives = 102/143 (71%), Gaps = 6/143 (4%)
 Frame = -1

Query: 411 SVCTSPGQENVRDEFEIVSENKHNVDSVSSFH------GEREKSAEIIEPERGDFAANEG 250
           ++C S  QE + +  ++ SEN  N   VSSF       GE E    ++  +R +FAA++ 
Sbjct: 115 ALCKSSSQEVLGETQDVASENGGNGALVSSFEEEDVGEGEEEAVEVVVGSKRKEFAADQS 174

Query: 249 IWNQLMEIVKFSGPATGLWLSGPLMSLIDTVVIGQSSSLELAALGPGTVLCDYLGYLFMF 70
           I NQ+ +IV FSGPAT LW+ GPLMSLIDT VIGQ SSLELAALGPGTVLCD + Y+FMF
Sbjct: 175 ILNQMKKIVMFSGPATALWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYVFMF 234

Query: 69  LSIATSNFVATALAGKDKDEVQH 1
           LSIATSN VATALA KDK EVQH
Sbjct: 235 LSIATSNMVATALARKDKKEVQH 257


>ref|XP_002274813.1| PREDICTED: MATE efflux family protein 4, chloroplastic [Vitis
           vinifera]
          Length = 567

 Score =  158 bits (399), Expect = 5e-37
 Identities = 85/143 (59%), Positives = 102/143 (71%), Gaps = 6/143 (4%)
 Frame = -1

Query: 411 SVCTSPGQENVRDEFEIVSENKHNVDSVSSFH------GEREKSAEIIEPERGDFAANEG 250
           ++C S  QE + +  ++ SEN  N   VSSF       GE E    ++  +R +FAA++ 
Sbjct: 61  ALCKSSSQEVLGETQDVASENGGNGALVSSFEEEDVGEGEEEAVEVVVGSKRKEFAADQS 120

Query: 249 IWNQLMEIVKFSGPATGLWLSGPLMSLIDTVVIGQSSSLELAALGPGTVLCDYLGYLFMF 70
           I NQ+ +IV FSGPAT LW+ GPLMSLIDT VIGQ SSLELAALGPGTVLCD + Y+FMF
Sbjct: 121 ILNQMKKIVMFSGPATALWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYVFMF 180

Query: 69  LSIATSNFVATALAGKDKDEVQH 1
           LSIATSN VATALA KDK EVQH
Sbjct: 181 LSIATSNMVATALARKDKKEVQH 203


>ref|XP_002274783.1| PREDICTED: MATE efflux family protein 4, chloroplastic-like [Vitis
           vinifera]
          Length = 535

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/129 (61%), Positives = 97/129 (75%)
 Frame = -1

Query: 387 ENVRDEFEIVSENKHNVDSVSSFHGEREKSAEIIEPERGDFAANEGIWNQLMEIVKFSGP 208
           E V D  E V+ N+ NV SVS    E E   E++   + +F  N+ IW Q+ EI+ F+GP
Sbjct: 16  EVVGDGVEFVAGNEENVGSVSLLE-EDEVEVEVVGVGKQEFGVNQSIWEQMKEIMMFTGP 74

Query: 207 ATGLWLSGPLMSLIDTVVIGQSSSLELAALGPGTVLCDYLGYLFMFLSIATSNFVATALA 28
           ATGLW+ GPLMSLIDT VIGQ SS+ELAALGPGTV+CDY+ Y+FMFLSIATSN VAT+LA
Sbjct: 75  ATGLWICGPLMSLIDTAVIGQGSSVELAALGPGTVVCDYMSYVFMFLSIATSNMVATSLA 134

Query: 27  GKDKDEVQH 1
            +DK+EVQH
Sbjct: 135 RQDKNEVQH 143


>ref|XP_002313018.1| predicted protein [Populus trichocarpa] gi|222849426|gb|EEE86973.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  148 bits (374), Expect = 4e-34
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 414 ISVCTSPGQENVRDEFEIVSENKHNVDSVSSFHGEREKSAEIIEPERGDFAANEGIWNQL 235
           ++ C SP  E+  +    V+EN+ + DS+S F  E       IE  R +   N+ +W Q+
Sbjct: 59  LAPCNSPAHESANNS---VTENESSTDSISEFIEETG-----IEVNR-EGLENQSMWEQM 109

Query: 234 MEIVKFSGPATGLWLSGPLMSLIDTVVIGQSSSLELAALGPGTVLCDYLGYLFMFLSIAT 55
            EIV F+GPATGLW+ GPLMSLIDT VIGQ SS+ELAALGPGTVLCD + Y+FMFLSIAT
Sbjct: 110 KEIVMFTGPATGLWICGPLMSLIDTAVIGQGSSIELAALGPGTVLCDGMSYIFMFLSIAT 169

Query: 54  SNFVATALAGKDKDEVQH 1
           SN VAT+LA +DK+EVQH
Sbjct: 170 SNMVATSLAKQDKNEVQH 187


>ref|XP_002878546.1| hypothetical protein ARALYDRAFT_480999 [Arabidopsis lyrata subsp.
           lyrata] gi|297324385|gb|EFH54805.1| hypothetical protein
           ARALYDRAFT_480999 [Arabidopsis lyrata subsp. lyrata]
          Length = 547

 Score =  146 bits (368), Expect = 2e-33
 Identities = 80/138 (57%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
 Frame = -1

Query: 405 CTSPGQENVRDEFE---IVSENKHNVDSVSSFHGEREKSAEIIEPERGDFAANEGIWNQL 235
           C SP QE V DE     ++SE  +   S              +E  + D  AN+ IW Q+
Sbjct: 57  CASPNQELVADEETGNGLISEEANGSISPE------------VEEVKVDDLANQNIWGQM 104

Query: 234 MEIVKFSGPATGLWLSGPLMSLIDTVVIGQSSSLELAALGPGTVLCDYLGYLFMFLSIAT 55
            EIV F+GPA GLWL GPLMSLIDT VIGQ SSLELAALGP TV+CDYL Y FMFLS+AT
Sbjct: 105 KEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFMFLSVAT 164

Query: 54  SNFVATALAGKDKDEVQH 1
           SN VAT+LA +DKDEVQH
Sbjct: 165 SNLVATSLARRDKDEVQH 182


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