BLASTX nr result

ID: Panax21_contig00034254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034254
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2...   188   6e-46
ref|XP_004160161.1| PREDICTED: RING finger protein 150-like [Cuc...   184   1e-44
ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|2...   175   5e-42
ref|XP_002310001.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34
ref|XP_002306335.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34

>ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  188 bits (478), Expect = 6e-46
 Identities = 96/163 (58%), Positives = 120/163 (73%), Gaps = 3/163 (1%)
 Frame = +3

Query: 48  MAAFSQFFSHLYTITVIFFTLLVLELVILFRSITGTFYPSDNGPITTTQYLKLIERKNPA 227
           MA+ S+FFSHLYT++++F +LL++E+VILF+S+ G+   S+   I+TTQYLK +E KNP 
Sbjct: 1   MASLSEFFSHLYTMSIVFLSLLLVEIVILFQSVIGSTLKSNKPIISTTQYLKHMEEKNPT 60

Query: 228 SRYKPGLKEQ--SKECSVCLSTFEEGEEIRKLKQCNHTFHKDCLDTWLQQDWATCPLCRR 401
             Y   L  Q  S EC+VCLS F EGE +RKL  C HTFHKDCLD WLQQ  ATCPLCR 
Sbjct: 61  ISYSEKLTRQQDSMECAVCLSKFSEGESVRKLN-CKHTFHKDCLDKWLQQSLATCPLCRA 119

Query: 402 TVLPEEIVAKYRRQRSNQDYYGSDEEMM-VILSALHGNYLRRL 527
            VLP+EIVAKY R ++   Y GSDEEM   +LSALHGN L+R+
Sbjct: 120 KVLPDEIVAKYDRMQNQIGYDGSDEEMAPFLLSALHGNGLQRI 162


>ref|XP_004160161.1| PREDICTED: RING finger protein 150-like [Cucumis sativus]
          Length = 208

 Score =  184 bits (466), Expect = 1e-44
 Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 4/158 (2%)
 Frame = +3

Query: 48  MAAFSQFFSHLYTITVIFFTLLVLELVILFRSITGTFYPSDNGPITTTQYLKLIERKNPA 227
           M A S+FFSHL+T+T +FFTLL+LE VIL R+I G    SD   ITT Q+ KLIE KNP 
Sbjct: 1   MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNSDKRVITTAQFFKLIEDKNPT 60

Query: 228 SRYK----PGLKEQSKECSVCLSTFEEGEEIRKLKQCNHTFHKDCLDTWLQQDWATCPLC 395
            R+     P + +Q   C+VCLS FEEGE++RKL QCNHTFHKDCLD WL+  +ATCPLC
Sbjct: 61  IRFSNKVTPSIADQ---CAVCLSEFEEGEKVRKL-QCNHTFHKDCLDNWLKLCFATCPLC 116

Query: 396 RRTVLPEEIVAKYRRQRSNQDYYGSDEEMMVILSALHG 509
           R  VLP++IVA Y R R   +Y GSDEE++ +LSALHG
Sbjct: 117 RSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG 154


>ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|222855783|gb|EEE93330.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  175 bits (444), Expect = 5e-42
 Identities = 89/149 (59%), Positives = 109/149 (73%), Gaps = 2/149 (1%)
 Frame = +3

Query: 87  ITVIFFTLLVLELVILFRSITGTFYPSDNGPITTTQYLKLIERKNPASRYKPGLKEQ--S 260
           + ++F +LL+LE+VIL RS+ G+   SD   I+TTQYL+ IE KNP   Y   L  Q  S
Sbjct: 1   MAIVFLSLLLLEIVILIRSVIGSTLKSDKPIISTTQYLRHIEEKNPTISYSKQLMRQQDS 60

Query: 261 KECSVCLSTFEEGEEIRKLKQCNHTFHKDCLDTWLQQDWATCPLCRRTVLPEEIVAKYRR 440
            EC+VCLS F EGE +RKLK C HTFHKDCLD WLQQ  ATCPLCR  VLP+EI+AKY R
Sbjct: 61  IECAVCLSEFSEGESVRKLK-CKHTFHKDCLDEWLQQCLATCPLCRAKVLPDEILAKYDR 119

Query: 441 QRSNQDYYGSDEEMMVILSALHGNYLRRL 527
            +S  +Y GSDEEM+ +LSALHGN L+R+
Sbjct: 120 MQSQIEYDGSDEEMIFMLSALHGNSLQRI 148


>ref|XP_002310001.1| predicted protein [Populus trichocarpa] gi|222852904|gb|EEE90451.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  151 bits (381), Expect = 1e-34
 Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
 Frame = +3

Query: 48  MAAFSQFFSHLYTITVIFFTLLVLELVILFRS-ITGTFYPSDNG--PITTTQYLKLIERK 218
           MA+  Q  S+LYT+ +  F LL+L  V+L RS + G+     +    I TTQY  L+E K
Sbjct: 1   MASLFQLLSYLYTMAIALFDLLLLRAVLLIRSAVPGSMVTHSDKLFRIITTQYFNLVEEK 60

Query: 219 NPASRYKPGLKE-QSKECSVCLSTFEEGEEIRKLKQCNHTFHKDCLDTWLQQDWATCPLC 395
           NP   Y   L+  +S+EC+VCLS F EGE +RKLK C HTFHKDCLD WL++  ATCPLC
Sbjct: 61  NPTICYSENLRHHESRECAVCLSEFLEGESLRKLK-CKHTFHKDCLDKWLEEYLATCPLC 119

Query: 396 RRTVLPEEIVAKYRRQRSNQDYYGSDEEMMVILSALHGNYLRRL 527
           R  VLPE +VA YR  + + +  GS ++   +LSAL+G++LRRL
Sbjct: 120 RTRVLPEGLVANYRLLKDHIENGGSYDDATFMLSALYGDFLRRL 163


>ref|XP_002306335.1| predicted protein [Populus trichocarpa] gi|222855784|gb|EEE93331.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  149 bits (376), Expect = 4e-34
 Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
 Frame = +3

Query: 48  MAAFSQFFSHLYTITVIFFTLLVLELVILFRSI---TGTFYPSDNGPITTTQYLKLIERK 218
           MAA  + FSHLYT  +  F L++L+ + L RS+   +    P     I +TQYL LIE+ 
Sbjct: 1   MAALLKVFSHLYTAIMSSFNLILLKTLFLIRSLLPGSKLTNPDKLFLIISTQYLSLIEKT 60

Query: 219 NPASRYKPGL-KEQSKECSVCLSTFEEGEEIRKLKQCNHTFHKDCLDTWLQQDWATCPLC 395
           NPA  Y     ++QS+EC+VCLS F +GE +RKL+ CNHTFHK+CLD WLQQ  ATCPLC
Sbjct: 61  NPAIHYSEKFSRQQSRECAVCLSGFMKGERVRKLR-CNHTFHKECLDKWLQQYLATCPLC 119

Query: 396 RRTVLPEEIVAKYRRQRSNQDYYGSDEEMMVILSALHGNYLRRL 527
           R  VLP+EIV  Y + +      GS ++ M +LSAL+GN L++L
Sbjct: 120 RTRVLPDEIVVNYHQLQDIIRNGGSYDDTMFLLSALYGNSLKKL 163


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