BLASTX nr result

ID: Panax21_contig00034253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034253
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27263.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-...    90   2e-16
gb|AFK35605.1| unknown [Lotus japonicus]                               86   4e-15
ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_003516351.1| PREDICTED: COBW domain-containing protein 1-...    77   1e-12

>emb|CBI27263.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = -1

Query: 421 DQLHTLQAVREIYEIVPTRKWKEEENHMNKIVFIGQSLNEEILLDSFRAC 272
           DQLHTLQAVREIYEIVPTRKWK EEN MNKIVFIG +LNE+ L +SFRAC
Sbjct: 314 DQLHTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRAC 363


>ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-like [Vitis vinifera]
          Length = 368

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = -1

Query: 421 DQLHTLQAVREIYEIVPTRKWKEEENHMNKIVFIGQSLNEEILLDSFRAC 272
           DQLHTLQAVREIYEIVPTRKWK EEN MNKIVFIG +LNE+ L +SFRAC
Sbjct: 314 DQLHTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRAC 363


>gb|AFK35605.1| unknown [Lotus japonicus]
          Length = 390

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = -1

Query: 421 DQLHTLQAVREIYEIVPTRKWKEEENHMNKIVFIGQSLNEEILLDSFRAC 272
           DQLHTLQAVRE+YEIVP RKW+ EEN MNKIVFIG +L E++L+ SFRAC
Sbjct: 338 DQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSFRAC 387


>ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|222852099|gb|EEE89646.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/54 (62%), Positives = 46/54 (85%)
 Frame = -1

Query: 421 DQLHTLQAVREIYEIVPTRKWKEEENHMNKIVFIGQSLNEEILLDSFRACTLAT 260
           D+LHTLQAVRE+Y+IVP RKW+ +EN +NKIVFIG +L E++L++SFR C + T
Sbjct: 322 DELHTLQAVRELYDIVPARKWRSDENQINKIVFIGHNLKEDVLINSFRDCIVTT 375


>ref|XP_003516351.1| PREDICTED: COBW domain-containing protein 1-like [Glycine max]
          Length = 365

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/48 (70%), Positives = 44/48 (91%)
 Frame = -1

Query: 421 DQLHTLQAVREIYEIVPTRKWKEEENHMNKIVFIGQSLNEEILLDSFR 278
           DQLHTLQAV+E+YEIVP+RKW++EE  +NKIVFIG +L E+IL++SFR
Sbjct: 313 DQLHTLQAVKELYEIVPSRKWEKEEKRINKIVFIGHNLKEDILINSFR 360


Top