BLASTX nr result

ID: Panax21_contig00034252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034252
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546920.1| PREDICTED: uncharacterized protein LOC100811...   102   3e-20
ref|XP_003542130.1| PREDICTED: uncharacterized protein LOC100810...    98   6e-19
gb|AFK41172.1| unknown [Medicago truncatula]                           77   2e-12
ref|XP_002887818.1| hypothetical protein ARALYDRAFT_477185 [Arab...    75   6e-12
ref|NP_178176.2| uncharacterized protein [Arabidopsis thaliana] ...    73   3e-11

>ref|XP_003546920.1| PREDICTED: uncharacterized protein LOC100811711 [Glycine max]
          Length = 248

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -2

Query: 330 MSDEEWLKAAVADDSLVVQLLLRLGHSSPPP--ALPIYWTVRQPCSKSITLKSATAGASP 157
           MSD+ W+K A+ADDSLVV LLLRL    PPP   L ++WTVRQ  S+S   K+ +  ASP
Sbjct: 1   MSDDHWIKVAMADDSLVVDLLLRLHRPPPPPPPCLNLHWTVRQRRSRSAHNKAESTRASP 60

Query: 156 TTPLSWSAATSHSGGAIDGLEEISRP 79
           TTPLSWS ATS SGG +DG EE SRP
Sbjct: 61  TTPLSWSGATSASGGNLDGYEEYSRP 86


>ref|XP_003542130.1| PREDICTED: uncharacterized protein LOC100810953 [Glycine max]
          Length = 238

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -2

Query: 330 MSDEEWLKAAVADDSLVVQLLLRLGHSSPPP-ALPIYWTVRQPCSKSITLKSATAGASPT 154
           M D+ W+K A+ADDSLVV LLLRL  S PPP  L ++WTVRQ  S+S   K+ +  ASPT
Sbjct: 1   MCDDHWVKVAMADDSLVVDLLLRLHRSPPPPPCLNLHWTVRQRRSRSAHNKAESTRASPT 60

Query: 153 TPLSWSAATSHSGGAIDGLEEISRP--PPGSKLTSPITT 43
           TPLSWS ATS SGG +DG EE S+P     SK+ +P  T
Sbjct: 61  TPLSWSGATSASGGNLDGYEE-SKPSQTSRSKVANPSET 98


>gb|AFK41172.1| unknown [Medicago truncatula]
          Length = 196

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -2

Query: 330 MSDEEWLKAAVADDSLVVQLLLRLGHSSPPPALPIYWTVRQPCSKSITLKSATAGASPTT 151
           M D +W+  A+A+DS+V  LLL   +  PPP+L ++WT+RQP S+SI    ++  ASPTT
Sbjct: 1   MCDYDWVNLAMANDSIVANLLLHFNNPPPPPSLQLHWTIRQPRSRSIPKSESSIRASPTT 60

Query: 150 PL--SWSAATSHS 118
           PL  SWSA TS S
Sbjct: 61  PLACSWSATTSAS 73


>ref|XP_002887818.1| hypothetical protein ARALYDRAFT_477185 [Arabidopsis lyrata subsp.
           lyrata] gi|297333659|gb|EFH64077.1| hypothetical protein
           ARALYDRAFT_477185 [Arabidopsis lyrata subsp. lyrata]
          Length = 199

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 54/119 (45%), Positives = 65/119 (54%), Gaps = 23/119 (19%)
 Frame = -2

Query: 330 MSDEEWLKAAVADDSLVVQLLLRLGHSSPPPA-----LPIYWTVRQPCSKSITLKSATAG 166
           MS E W++ A++DDSLV + LLRL HS P  +     L + W+VRQ  SK    K     
Sbjct: 1   MSGENWIRVAMSDDSLVAEALLRLRHSEPKKSVDASPLKLKWSVRQRRSK----KGDQTR 56

Query: 165 ASPTTPLSWSAATSHSGG-----------AIDGLEEISR-----PPPGSKL--TSPITT 43
           ASPTTPLSWS ATS SGG            ++GLEE S       P  SK+  TS ITT
Sbjct: 57  ASPTTPLSWSGATSLSGGGGSGGSGGGATTVEGLEESSAAVKPFEPFRSKISQTSAITT 115


>ref|NP_178176.2| uncharacterized protein [Arabidopsis thaliana]
           gi|17979500|gb|AAL50086.1| At1g80610/T21F11_6
           [Arabidopsis thaliana] gi|20147293|gb|AAM10360.1|
           At1g80610/T21F11_6 [Arabidopsis thaliana]
           gi|332198306|gb|AEE36427.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 211

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 53/119 (44%), Positives = 64/119 (53%), Gaps = 23/119 (19%)
 Frame = -2

Query: 330 MSDEEWLKAAVADDSLVVQLLLRLGHSSP-----PPALPIYWTVRQPCSKSITLKSATAG 166
           MS E W++ A++DDS+V + LLRL HS P        L + W+VRQ  SK    K     
Sbjct: 1   MSGENWIRVAMSDDSMVAEALLRLRHSEPKNRVDASPLKLKWSVRQRRSK----KGDQTR 56

Query: 165 ASPTTPLSWSAATSHSGG-----------AIDGLEEIS-----RPPPGSKL--TSPITT 43
           ASPTTPLSWS ATS SGG            ++GLEE S       P  SK+  TS ITT
Sbjct: 57  ASPTTPLSWSGATSLSGGGGSGGSGAGATTMEGLEESSAAVKPSEPFRSKISQTSAITT 115


Top