BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034250
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313372.1| f-box family protein [Populus trichocarpa] g...    65   7e-09
ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vi...    62   4e-08
ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cuc...    62   6e-08
ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cuc...    62   8e-08
ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vit...    57   2e-06

>ref|XP_002313372.1| f-box family protein [Populus trichocarpa]
           gi|222849780|gb|EEE87327.1| f-box family protein
           [Populus trichocarpa]
          Length = 361

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
 Frame = +1

Query: 1   KCLCRCYSICKRFSLIISHIQSVCRTMPYHNNTSCPNYHNHPRQDMNLPTKVFGFLVDNF 180
           K L RC S+ KRF+ ++    +V  ++P       P  HN    + +L   +F  L+   
Sbjct: 47  KSLTRCISVSKRFASLVFEADTVFLSIP-------PRKHNPKADNRSLRRNLFKILISTL 99

Query: 181 FSRPFRYLNQIVNRQKLPPLPFNLISFRSASGFLKKIKAIRNLHLEVPS------LYGGD 342
            ++P  + ++ +  +         +SF S    LK  +  + +H+E+PS      L G D
Sbjct: 100 IAKPLHFFHRFIADRS--DTDRKTVSFYSPKEVLKHFQQAKTMHMELPSDGGMTGLEGND 157

Query: 343 SVLKW*GVFGKGSSSCIILFATSFHE 420
           S++KW   FG    + +IL ATSF +
Sbjct: 158 SLIKWKARFGSEIKNFVILSATSFQK 183


>ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vinifera]
           gi|296083830|emb|CBI24218.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
 Frame = +1

Query: 7   LCRCYSICKRFSLIISHIQSVCRTMPYHNNTSCPNYHNHPRQDMNLPTKVFG--FLVDNF 180
           LCRC ++ KRF+ +I  + +V  T+P   +         P + + L    FG    V NF
Sbjct: 32  LCRCSAVSKRFASLIPLVDAVLLTIPPPKSK--------PNRGLFLN---FGNSLQVTNF 80

Query: 181 FSRPFRYLNQIVNRQKLPPLPFNLISFRSASG--------FLKKIKAIRNLHLEVPSLYG 336
            ++  ++L+QIV       LP + +SF S  G         LK    I +LH+++PS +G
Sbjct: 81  IAKLLQFLHQIV-------LPQSSVSFHSNEGSIHHFSSEVLKNFSHITSLHIQLPS-HG 132

Query: 337 GD-------SVLKW*GVFGKGSSSCIILFATSFHEEN 426
           G+       S+LKW   FG+   SC++L AT F   N
Sbjct: 133 GELGANGTGSLLKWEAEFGRELESCVVLGATYFERSN 169


>ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
 Frame = +1

Query: 7   LCRCYSICKRFSLIISHIQSVCRTMPYHNNTSCPNYHNHPRQDMNLPTKVFGFLVDNFFS 186
           L RC ++ KRF+ +I    SV  ++P    T  P     PR     PT    F +  FF 
Sbjct: 33  LIRCLAVSKRFASLIPQSDSVFLSIPPLLLTPNPKSRTTPRS----PT----FFLRKFFF 84

Query: 187 RPFRYLNQIVNRQKLPPLPFNLISFRSASGFLKKIKAIRNLHLEVP-------SLYGGDS 345
            PFR++ +++         F    +   S  LK++K  ++LH+++P       S + G +
Sbjct: 85  NPFRFIRRLITHTSQSTPRFT-DWYYWPSVALKELKGFKSLHIQLPCCGDEIGSNHNGGA 143

Query: 346 VLKW*GVFGKGSSSCIILFATSFHEENTKEYEVTA 450
           +LKW   FG    +C++L A+S   ++  E E +A
Sbjct: 144 LLKWKAEFGSELKTCVVLGASSLRRKSVVESESSA 178


>ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
 Frame = +1

Query: 7   LCRCYSICKRFSLIISHIQSVCRTMPYHNNTSCPNYHNHPRQDMNLPTKVFGFLVDNFFS 186
           L RC ++ KRF+ +I    SV  ++P    T  P     PR     PT    F +  FF 
Sbjct: 33  LIRCLAVSKRFASLIPQSDSVFLSIPPLLLTPNPKSRTTPRS----PT----FFLRKFFF 84

Query: 187 RPFRYLNQIVNRQKLPPLPFNLISFRSASGFLKKIKAIRNLHLEVP-------SLYGGDS 345
            PFR++ +++         F    +   S  LK++K  ++LH+++P       S + G +
Sbjct: 85  NPFRFIRRLITHTSQSTPRFT-DWYYWPSVALKELKGFQSLHIQLPCCGDEIGSNHNGGA 143

Query: 346 VLKW*GVFGKGSSSCIILFATSFHEENTKEYEVTA 450
           +LKW   FG    +C++L A+S   ++  E E +A
Sbjct: 144 LLKWKAEFGSELKTCVVLGASSLRRKSVVESESSA 178


>ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vitis vinifera]
          Length = 341

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
 Frame = +1

Query: 1   KCLCRCYSICKRFSLIISHIQSVCRTMPYHNNTSCPNYHNHPRQDMNLPTKVFGFLVDNF 180
           K LCRC  + KRF+ +I    +V   +P  NN+        P++          +LV  F
Sbjct: 30  KSLCRCSVVSKRFASLIPQTDNVSLIVPSSNNSK-------PKRGTFFIV-FLKYLVGKF 81

Query: 181 FSRPFRYLNQIVNRQKLPPLPFNLI---SFRSASGFLKKIKAIRNLHLEVP------SLY 333
            ++P ++L Q V    +P L  N     +++  +  L+    I+ L +++P         
Sbjct: 82  ITKPLQFLYQTV----VPKLSVNSDEDETYQFTTEVLRNFINIKRLSIQLPCHGDELGSK 137

Query: 334 GGDSVLKW*GVFGKGSSSCIILFATSFHEENT 429
           G D  L+W   FG+   SC++L ATSFH  ++
Sbjct: 138 GTDYFLRWKAEFGRELESCVVLGATSFHRSSS 169