BLASTX nr result
ID: Panax21_contig00034241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034241 (456 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar... 125 4e-27 dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana] 125 4e-27 ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp.... 119 2e-25 emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera] 116 2e-24 ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252... 115 4e-24 >ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana] gi|332005896|gb|AED93279.1| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana] Length = 1598 Score = 125 bits (314), Expect = 4e-27 Identities = 74/152 (48%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Frame = +3 Query: 3 LNASHCEELEIKGALPFDAVVDAGHVPPDEVVAVVRPTSFNSVGTSKTLDQKYIARVDSE 182 L+ C EL+I G LP V AG PP ++VAVVRP F S+ SK LDQK I ++D E Sbjct: 733 LDERDCRELKIDGELPIGNSVRAGKAPPKQIVAVVRPACFTSLTPSKKLDQKNIVKMDGE 792 Query: 183 -MALEIKFMAEDKNLQEYTHIHSARVSPLLRKGIHGLYIFSLRSKFPNLFEKAGQYKFSF 359 M + +K + DKN I S R+ P RKGI GLYIFSL SKFPNLF+KAG Y FSF Sbjct: 793 EMVMVVKLKSSDKN------ISSQRLFPTSRKGISGLYIFSLGSKFPNLFKKAGTYNFSF 846 Query: 360 HLIDSSCGNYVKSVEVKALSQATRWGLVNDMQ 455 + +S N K+V V+ S+A RW L ++++ Sbjct: 847 SIGNSIKCN--KTVVVRPSSKAARWELDDNLE 876 >dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana] Length = 1634 Score = 125 bits (314), Expect = 4e-27 Identities = 74/152 (48%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Frame = +3 Query: 3 LNASHCEELEIKGALPFDAVVDAGHVPPDEVVAVVRPTSFNSVGTSKTLDQKYIARVDSE 182 L+ C EL+I G LP V AG PP ++VAVVRP F S+ SK LDQK I ++D E Sbjct: 742 LDERDCRELKIDGELPIGNSVRAGKAPPKQIVAVVRPACFTSLTPSKKLDQKNIVKMDGE 801 Query: 183 -MALEIKFMAEDKNLQEYTHIHSARVSPLLRKGIHGLYIFSLRSKFPNLFEKAGQYKFSF 359 M + +K + DKN I S R+ P RKGI GLYIFSL SKFPNLF+KAG Y FSF Sbjct: 802 EMVMVVKLKSSDKN------ISSQRLFPTSRKGISGLYIFSLGSKFPNLFKKAGTYNFSF 855 Query: 360 HLIDSSCGNYVKSVEVKALSQATRWGLVNDMQ 455 + +S N K+V V+ S+A RW L ++++ Sbjct: 856 SIGNSIKCN--KTVVVRPSSKAARWELDDNLE 885 >ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297320020|gb|EFH50442.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1607 Score = 119 bits (299), Expect = 2e-25 Identities = 71/155 (45%), Positives = 95/155 (61%), Gaps = 4/155 (2%) Frame = +3 Query: 3 LNASHCEELEIKGALPFDAVVDAGHVPPDEVVAVVRPTSFNSVGTSKTLDQKYIARVDSE 182 L+ C EL+I G LP V AG P ++VAVVRP F S SK LDQK+I ++D E Sbjct: 729 LDERDCRELKIDGELPVGDSVRAGKATPKQIVAVVRPACFTSSTPSKKLDQKHIVKMDGE 788 Query: 183 -MALEIKFMAEDKNLQEYTHIHSARVSPLLRKGIHGLYIFSLRSKFPNLFEKAGQYKFSF 359 M + + + DKN++ + S R+ P RKGI GLYIF L SKFPNLF+KAG YKFSF Sbjct: 789 EMVMVVTLKSSDKNVKS---VCSQRMFPTSRKGISGLYIFPLGSKFPNLFKKAGTYKFSF 845 Query: 360 HLIDSSCGNYV---KSVEVKALSQATRWGLVNDMQ 455 S GN + K+V V+ S+A +W L ++++ Sbjct: 846 -----SIGNLIKCNKTVVVRPSSKAAKWELDDNLE 875 >emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera] Length = 1459 Score = 116 bits (291), Expect = 2e-24 Identities = 66/137 (48%), Positives = 82/137 (59%), Gaps = 15/137 (10%) Frame = +3 Query: 3 LNASHCEELEIKGALPFDAVVDAGHVPPDEVVAVVRPTSFNSVG---------------T 137 L+ HC ELE+ GALP DA V AG VPP E+VAVVRP SF S Sbjct: 869 LSERHCLELEVDGALPVDAPVHAGQVPPKEIVAVVRPASFVSSSASKNLDQKYIIKDNFA 928 Query: 138 SKTLDQKYIARVDSEMALEIKFMAEDKNLQEYTHIHSARVSPLLRKGIHGLYIFSLRSKF 317 SK LDQKYI + + E+++E+K M K+ + HI+S V+P R G HGLYIF L KF Sbjct: 929 SKNLDQKYIIKDNLELSMEVKLMDGTKDTK---HIYSKCVTPSSRNGFHGLYIFPLGCKF 985 Query: 318 PNLFEKAGQYKFSFHLI 368 P LF+KAG Y F+ L+ Sbjct: 986 PQLFQKAGVYTFTVFLV 1002 >ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera] Length = 1887 Score = 115 bits (288), Expect = 4e-24 Identities = 66/136 (48%), Positives = 81/136 (59%), Gaps = 15/136 (11%) Frame = +3 Query: 3 LNASHCEELEIKGALPFDAVVDAGHVPPDEVVAVVRPTSFNSVG---------------T 137 L+ HC ELE+ GALP DA V AG VPP E+VAVVRP SF S Sbjct: 740 LSERHCLELEVDGALPVDAPVHAGQVPPKEIVAVVRPASFVSSSASKNLDQKYIIKDNFA 799 Query: 138 SKTLDQKYIARVDSEMALEIKFMAEDKNLQEYTHIHSARVSPLLRKGIHGLYIFSLRSKF 317 SK LDQKYI + + E+++E+K M K+ + HI+S V+P R G HGLYIF L KF Sbjct: 800 SKNLDQKYIIKDNLELSMEVKLMDGTKDTK---HIYSKCVTPSSRNGFHGLYIFPLGCKF 856 Query: 318 PNLFEKAGQYKFSFHL 365 P LF+KAG Y F+ L Sbjct: 857 PQLFQKAGVYTFTVFL 872