BLASTX nr result
ID: Panax21_contig00034237
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034237 (780 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2... 52 1e-08 ref|XP_003599621.1| F-box/kelch-repeat protein [Medicago truncat... 52 2e-08 emb|CBI40164.3| unnamed protein product [Vitis vinifera] 52 4e-08 ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm... 49 1e-07 ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 49 2e-07 >ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1| predicted protein [Populus trichocarpa] Length = 445 Score = 51.6 bits (122), Expect(2) = 1e-08 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 6/157 (3%) Frame = -2 Query: 455 SLKTKCWKRVK-FSYDIMSASDGPVVEGRLHWRVVYKEDYSGSEEILCFDPTTNELAVLP 279 +LK +CW+R++ F + G V+G+L W V+ + + I+ FD + Sbjct: 264 ALKGECWRRLEDFGLGLPYDVSGKHVDGKLCWPVMPEGSIGSAWSIVAFDLAQEMFEEVV 323 Query: 278 TRKPKYGNRDLLVSGLGVLKGNLXXXXXXXXXXXXXQSHFEVTVMKEYGVVESWTTLFVI 99 +P YG LGVL+G L +V V+KE+GV +SWT LF I Sbjct: 324 --QPDYGAVGY-ERVLGVLQGWLCVMCNYQGVRA------DVWVLKEFGVRDSWTKLFSI 374 Query: 98 SNLVTPI-----MPLSFTRDGELLMTIRYEKIVAYNP 3 L P+ +PL GE+L+ + +V YNP Sbjct: 375 PYLDDPLWFHYSVPLCIDVGGEVLLEYK-SVLVIYNP 410 Score = 33.9 bits (76), Expect(2) = 1e-08 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Frame = -3 Query: 637 GLVNGLLLIEIGNSFF-LWNPFTGYFNNVLNGWY---LGGS--IGFCYDPCTDDYKLLA 479 G +GL+ + I F LWNP T FN + + + LG GF YD DDYK+LA Sbjct: 183 GSCDGLVCLGIKQDFVVLWNPSTRVFNRLPDLGFAKKLGSYTVFGFGYDSQIDDYKVLA 241 >ref|XP_003599621.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355488669|gb|AES69872.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 359 Score = 52.0 bits (123), Expect(2) = 2e-08 Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 3/136 (2%) Frame = -2 Query: 455 SLKTKCWKRVK-FSYDIMSAS-DGPVVEGRLHWRVVYKEDYSGSEEILCFDPTTNELA-V 285 +L T WK ++ F + +M G V GR++W I+ FD V Sbjct: 187 TLGTHFWKTIQEFPFGVMPVEKSGKFVSGRINWLASTDLRLQSPRFIVSFDLRKESYEKV 246 Query: 284 LPTRKPKYGNRDLLVSGLGVLKGNLXXXXXXXXXXXXXQSHFEVTVMKEYGVVESWTTLF 105 LP D+ L VL+ L H ++ VMKEYG+ ESWT LF Sbjct: 247 LPP-----DGVDVCNLSLSVLRDCLSIFA----------GHHDIWVMKEYGIQESWTKLF 291 Query: 104 VISNLVTPIMPLSFTR 57 ISN+ +P +SFT+ Sbjct: 292 TISNMPSPNSSVSFTK 307 Score = 32.7 bits (73), Expect(2) = 2e-08 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Frame = -3 Query: 712 MLLSLELP---TPRRSTKITPTLY-------PRFKGLVNGLLLIEIGN-SFFLWNPFTGY 566 ML S +L T R +T +T Y P G NG L + N S LWNP Sbjct: 84 MLTSYQLNCLFTRRVTTNVTKLKYRFNNCNKPNIVGSCNGFLCVAFSNYSIVLWNPSINK 143 Query: 565 FNNV----LNGWYLGGSIGFCYDPCTDDYKLL 482 F + + + F YD TD+YK++ Sbjct: 144 FKELPLIQKSQGITNLTFSFGYDSLTDNYKVI 175 >emb|CBI40164.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 51.6 bits (122), Expect(2) = 4e-08 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 4/155 (2%) Frame = -2 Query: 455 SLKTKCWKRVKFSYD--IMSASDGPVVEGRLHWRVVYKEDYSGSEE-ILCFDPTTNELAV 285 SL+T W++V + I S + G LHW K + ++ IL FD + Sbjct: 197 SLRTGSWRKVDANICCYIHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKE 256 Query: 284 LPTRKPKYGNRDLLVSGLGVLKGNLXXXXXXXXXXXXXQSHFEVTVMKEYGVVESWTTLF 105 + P +G +L+ L KG+L + +V VM+EYGV +SWT F Sbjct: 257 IML--PDFGYDELIRKCLADYKGSLSVLFYDAYHSN---ENCDVWVMEEYGVAKSWTKHF 311 Query: 104 VISNLVTPIMPLSFTRDGE-LLMTIRYEKIVAYNP 3 I + + I+P F +GE +L + +++NP Sbjct: 312 TIRHEIEIIIPFEFFDNGEAILQKKKSGGFISWNP 346 Score = 32.0 bits (71), Expect(2) = 4e-08 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 16/89 (17%) Frame = -3 Query: 700 LELPTPRRSTKITPTLYPRFKGLVNGLLLIEIGN--------SFFLWNPFTGYF------ 563 LE+P P + T Y + G NGL+ + N + FLWNP F Sbjct: 99 LEVPVPSK------TDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKY 152 Query: 562 --NNVLNGWYLGGSIGFCYDPCTDDYKLL 482 NN + + G +GF + P +DYK++ Sbjct: 153 HINNFTSPLMVVG-LGFAFHPVINDYKVV 180 >ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis] gi|223543894|gb|EEF45420.1| conserved hypothetical protein [Ricinus communis] Length = 403 Score = 48.9 bits (115), Expect(2) = 1e-07 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Frame = -2 Query: 455 SLKTKCWKRV-KFSYDIMSASDGPVVEGRLHWRVVYKEDYSGSEEIL-CFDPTTNELAVL 282 SL+T W+++ F +D G + G +HW + +E+ ++ FD + Sbjct: 223 SLRTDSWRKIDNFCHDFCFHHSGVFLRGAIHWMAINREEVDDEYYVISAFDMEKELFWDM 282 Query: 281 PTRKPKYGNRDLLVSGLGVLKGNLXXXXXXXXXXXXXQSHFEVTVMKEYGVVESWTTLFV 102 P + + + + LG L +L H + VM EYGV ESWT L + Sbjct: 283 PAPDMEDDDSEFM---LGTLNEDLCVLKSFNEM------HNDFWVMHEYGVGESWTRLTI 333 Query: 101 ISNLVTPIMPLSFTRDGELLMTIRYEKIVAYN 6 + + + PL ++GE L+ I ++V YN Sbjct: 334 SLSYIC-MKPLCLAKNGEALLDID-GRLVQYN 363 Score = 33.5 bits (75), Expect(2) = 1e-07 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3 Query: 637 GLVNGLLLIEIG-NSFFLWNPFTGYFNNVLNGWYLGGSIGFCYDPCTDDYKLL 482 G NGLL I +S FL+NP T +L + GF YD DDYK++ Sbjct: 159 GSCNGLLCIAPDEDSLFLFNPSTRESKKILEESNYVTAFGFGYDSTRDDYKVV 211 >ref|XP_002301588.1| f-box family protein [Populus trichocarpa] gi|222843314|gb|EEE80861.1| f-box family protein [Populus trichocarpa] Length = 408 Score = 48.5 bits (114), Expect(2) = 2e-07 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 22/177 (12%) Frame = -2 Query: 467 VYSMSLKTKCWKRV-KFSYDIMSASDGPVVEGRLHWRVVYKEDYSGSEEILCFDPTTNEL 291 V ++L W+ + K SY ++ + +V GRLHW V + ++ FD T + Sbjct: 207 VQILTLGCPGWRSLGKVSYRLVRRASETLVNGRLHW-VSRPCRNKPARRLVSFDLTDEQF 265 Query: 290 AVLPTRKPKYGNRDLLVSGLGVLKGNLXXXXXXXXXXXXXQSHFEVTVMKEYGVVESWTT 111 +P KP G + L VL+G L E+ VMKEY V ESW Sbjct: 266 REVP--KPDCGGLNRCDYHLAVLRGCLSVAVYCNY------GRLEIWVMKEYNVKESWVK 317 Query: 110 LFVI---------SNLVTP------------IMPLSFTRDGELLMTIRYEKIVAYNP 3 + I NLV P + L ++GE+L+ + +V+Y+P Sbjct: 318 EYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDP 374 Score = 32.7 bits (73), Expect(2) = 2e-07 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%) Frame = -3 Query: 658 TLYPRFK--GLVNGLLLIE---IGNSFFLWNPFTGYFNNVLNGWYLGGS---IGFCYDPC 503 ++ P F+ G NGLL + +S +++NPFTG + + GF ++P Sbjct: 116 SMMPEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPK 175 Query: 502 TDDYKLL 482 T++YK++ Sbjct: 176 TNEYKVI 182