BLASTX nr result
ID: Panax21_contig00034235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00034235
(1190 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata] 375 e-101
ref|XP_002268265.1| PREDICTED: protein TOPLESS [Vitis vinifera] ... 370 e-100
ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPL... 367 2e-99
ref|XP_004152185.1| PREDICTED: protein TOPLESS-like [Cucumis sat... 367 2e-99
gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein... 367 2e-99
>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
Length = 1127
Score = 375 bits (962), Expect = e-101
Identities = 180/381 (47%), Positives = 255/381 (66%), Gaps = 4/381 (1%)
Frame = +1
Query: 22 EGNINTKIGRVTEMHNLSQFRSLTL-HSAEQNKVARLTFTHSGKGIILLSMNGTHQCWRW 198
E N +K+ ++TE+ +Q RSL L + K++RL FT+SG I+ L+ N H W+W
Sbjct: 735 ESNDKSKVWKLTELSEPNQCRSLRLPENLRATKISRLIFTNSGNAILALASNAIHLLWKW 794
Query: 199 KNTDINVEGKVTTEYHPYIWKSEAGLMMINDITNVQTEEASHCFALSNSDSYLISTSGGP 378
+ T+ N GK T P +W+ +G+MM ND+T+ EEA CFALS +DSY++S SGG
Sbjct: 795 QRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGK 854
Query: 379 LTLFNVVTWQAVTDVMRPPPLVTCVAFNPQDNNLVTVGMNDSSIQMYDFRVQEFKVKAVG 558
++LFN++T++ + M PPP T +AF+PQDNN++ +GM+DSSIQ+Y+ RV E K K G
Sbjct: 855 ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKG 914
Query: 559 HCRKITGLAFSLELNILVSAAADAEIIVWSLDTWVRQRSTYLQIPNARVRARLSDTEVQF 738
H ++ITGLAFS LN+LVS+ AD+++ VW D W +Q++ +LQIP R SDT VQF
Sbjct: 915 HSKRITGLAFSHALNVLVSSGADSQLCVWGSDGWEKQKNRFLQIPTGRTPTAQSDTRVQF 974
Query: 739 HTDQKHFLAIHETQLALYETSKLIRIKQWTRAAHLSVLVSAAFSCDSQLVYACFRDGLLG 918
H DQ HFL +HETQLA++ET+KL +KQW + + A FSCDSQLVYACF D +
Sbjct: 975 HQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVC 1034
Query: 919 VFSTSTFELQCVVHPMAYIPESLRGRIYPTAIASNPNAVNQFAVGLSDGRVILLEPLETE 1098
VFS + +L+C ++P AY+P + ++P IA++P N+FA+GLSDG V + EPLE+E
Sbjct: 1035 VFSAANLKLRCRINPSAYLPAGVSSNVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLESE 1094
Query: 1099 SEWG---RVERG*RSYAPAAP 1152
+WG V+ G S PA P
Sbjct: 1095 GKWGVPPPVDNGSTSSMPATP 1115
>ref|XP_002268265.1| PREDICTED: protein TOPLESS [Vitis vinifera]
gi|297743564|emb|CBI36431.3| unnamed protein product
[Vitis vinifera]
Length = 1138
Score = 370 bits (951), Expect = e-100
Identities = 185/388 (47%), Positives = 257/388 (66%), Gaps = 5/388 (1%)
Frame = +1
Query: 22 EGNINTKIGRVTEMHNLSQFRSLTLH-SAEQNKVARLTFTHSGKGIILLSMNGTHQCWRW 198
E N +KI ++TE++ SQ RSL L + K++RL +T+SG I+ L+ N H W+W
Sbjct: 745 ETNDKSKIWKLTEINETSQCRSLRLQENLRITKISRLIYTNSGNAILALASNAIHFLWKW 804
Query: 199 KNTDINVEGKVTTEYHPYIWKSEAGLMMINDITNVQTEEASHCFALSNSDSYLISTSGGP 378
+ D N GK T P +W+ +G++M ND+ + EEA CFALS +DSY++S SGG
Sbjct: 805 QRNDRNSSGKATATVSPQLWQPTSGILMTNDVADTNPEEAVPCFALSKNDSYVMSASGGK 864
Query: 379 LTLFNVVTWQAVTDVMRPPPLVTCVAFNPQDNNLVTVGMNDSSIQMYDFRVQEFKVKAVG 558
++LFN++T++ +T M PPP T +AF+PQDNN++ +GM+DS+IQ+Y+ RV E K K G
Sbjct: 865 ISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKG 924
Query: 559 HCRKITGLAFSLELNILVSAAADAEIIVWSLDTWVRQRSTYLQIPNARVRARLSDTEVQF 738
H ++ITGLAFS LN+LVS+ ADA++ VWS D W +Q+S +LQ+P R SDT VQF
Sbjct: 925 HSKRITGLAFSHVLNVLVSSGADAQLCVWSSDGWEKQKSRFLQVPAGRTSTGQSDTRVQF 984
Query: 739 HTDQKHFLAIHETQLALYETSKLIRIKQWTRAAHLSVLVSAAFSCDSQLVYACFRDGLLG 918
H DQ HFL +HETQLA+YE +KL +KQW + + + A FSCDS LVYA F D +
Sbjct: 985 HQDQTHFLVVHETQLAIYEATKLDCVKQWVQREAAAPISHATFSCDSLLVYASFLDATVC 1044
Query: 919 VFSTSTFELQCVVHPMAYIPESL-RGRIYPTAIASNPNAVNQFAVGLSDGRVILLEPLET 1095
VFS + L+C ++P AY+P S+ ++P IA++P NQFA+GLSDG V + EPLE+
Sbjct: 1045 VFSAANLRLRCRINPTAYLPASVSNSNVHPLVIAAHPQEPNQFALGLSDGGVCVFEPLES 1104
Query: 1096 ESEWG---RVERG*RSYAPAAPDHVAPS 1170
E +WG VE G S PA P V PS
Sbjct: 1105 EGKWGVPPPVENGSASSVPATPS-VGPS 1131
>ref|XP_004165893.1| PREDICTED: LOW QUALITY PROTEIN: protein TOPLESS-like [Cucumis
sativus]
Length = 1139
Score = 367 bits (943), Expect = 2e-99
Identities = 178/382 (46%), Positives = 258/382 (67%), Gaps = 5/382 (1%)
Frame = +1
Query: 22 EGNINTKIGRVTEMHNLSQFRSLTL-HSAEQNKVARLTFTHSGKGIILLSMNGTHQCWRW 198
+ N +KI ++TE++ SQ RSL L + NK++RL +T+SG I+ L+ N H W+W
Sbjct: 746 DSNDKSKIWKLTEINEPSQCRSLRLPENVRVNKISRLIYTNSGSAILALASNAIHLLWKW 805
Query: 199 KNTDINVEGKVTTEYHPYIWKSEAGLMMINDITNVQTEEASHCFALSNSDSYLISTSGGP 378
++ N GK T P +W+ +G++M ND+ + +EEA CFALS +DSY++S SGG
Sbjct: 806 TRSERNSTGKATANVLPQLWQPSSGILMTNDVADTSSEEAVPCFALSKNDSYVMSASGGK 865
Query: 379 LTLFNVVTWQAVTDVMRPPPLVTCVAFNPQDNNLVTVGMNDSSIQMYDFRVQEFKVKAVG 558
++LFN++T++ +T M PPP T +AF+PQDNN++ +GM+DS+IQ+Y+ RV E K K G
Sbjct: 866 ISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKG 925
Query: 559 HCRKITGLAFSLELNILVSAAADAEIIVWSLDTWVRQRSTYLQIPNARVRARLSDTEVQF 738
H ++ITGLAFS LN+LVS+ ADA++ VWS D W +Q++ +LQ+P+ R + SDT VQF
Sbjct: 926 HSKRITGLAFSHLLNVLVSSGADAQLCVWSSDVWEKQKTRFLQLPSGRPPSSQSDTRVQF 985
Query: 739 HTDQKHFLAIHETQLALYETSKLIRIKQWTRAAHLSVLVSAAFSCDSQLVYACFRDGLLG 918
H DQ HFL +HETQ+A+YET+KL +KQWT + + A FSCDSQ++YA F D +
Sbjct: 986 HQDQVHFLVVHETQIAIYETTKLECVKQWTPRESGAPISHATFSCDSQMIYASFLDATVC 1045
Query: 919 VFSTSTFELQCVVHPMAYIPESL-RGRIYPTAIASNPNAVNQFAVGLSDGRVILLEPLET 1095
VF+ ++ L+C + P AY+P S+ + P IA++P NQFA+GLSDG V + EPLE+
Sbjct: 1046 VFTVASLRLRCRISPSAYLPASVSNASVQPLVIAAHPQEANQFALGLSDGGVHVFEPLES 1105
Query: 1096 ESEWG---RVERG*RSYAPAAP 1152
E +WG VE G S P P
Sbjct: 1106 EGKWGVPPPVENGSASSVPTTP 1127
>ref|XP_004152185.1| PREDICTED: protein TOPLESS-like [Cucumis sativus]
Length = 1139
Score = 367 bits (943), Expect = 2e-99
Identities = 178/382 (46%), Positives = 258/382 (67%), Gaps = 5/382 (1%)
Frame = +1
Query: 22 EGNINTKIGRVTEMHNLSQFRSLTL-HSAEQNKVARLTFTHSGKGIILLSMNGTHQCWRW 198
+ N +KI ++TE++ SQ RSL L + NK++RL +T+SG I+ L+ N H W+W
Sbjct: 746 DSNDKSKIWKLTEINEPSQCRSLRLPENVRVNKISRLIYTNSGSAILALASNAIHLLWKW 805
Query: 199 KNTDINVEGKVTTEYHPYIWKSEAGLMMINDITNVQTEEASHCFALSNSDSYLISTSGGP 378
++ N GK T P +W+ +G++M ND+ + +EEA CFALS +DSY++S SGG
Sbjct: 806 TRSERNSTGKATANVLPQLWQPSSGILMTNDVADTSSEEAVPCFALSKNDSYVMSASGGK 865
Query: 379 LTLFNVVTWQAVTDVMRPPPLVTCVAFNPQDNNLVTVGMNDSSIQMYDFRVQEFKVKAVG 558
++LFN++T++ +T M PPP T +AF+PQDNN++ +GM+DS+IQ+Y+ RV E K K G
Sbjct: 866 ISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKG 925
Query: 559 HCRKITGLAFSLELNILVSAAADAEIIVWSLDTWVRQRSTYLQIPNARVRARLSDTEVQF 738
H ++ITGLAFS LN+LVS+ ADA++ VWS D W +Q++ +LQ+P+ R + SDT VQF
Sbjct: 926 HSKRITGLAFSHLLNVLVSSGADAQLCVWSSDVWEKQKTRFLQLPSGRPPSSQSDTRVQF 985
Query: 739 HTDQKHFLAIHETQLALYETSKLIRIKQWTRAAHLSVLVSAAFSCDSQLVYACFRDGLLG 918
H DQ HFL +HETQ+A+YET+KL +KQWT + + A FSCDSQ++YA F D +
Sbjct: 986 HQDQVHFLVVHETQIAIYETTKLECVKQWTPRESGAPISHATFSCDSQMIYASFLDATVC 1045
Query: 919 VFSTSTFELQCVVHPMAYIPESL-RGRIYPTAIASNPNAVNQFAVGLSDGRVILLEPLET 1095
VF+ ++ L+C + P AY+P S+ + P IA++P NQFA+GLSDG V + EPLE+
Sbjct: 1046 VFTVASLRLRCRISPSAYLPASVSNASVQPLVIAAHPQEANQFALGLSDGGVHVFEPLES 1105
Query: 1096 ESEWG---RVERG*RSYAPAAP 1152
E +WG VE G S P P
Sbjct: 1106 EGKWGVPPPVENGSASSVPTTP 1127
>gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein T21F11.18 gi|6730738 from
Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains
multiple WD PF|00400 domains. ESTs gb|Z34157,
gb|AA006273, gb|AA605431, gb|W43588, gb|W43605,
gb|Z34559, gb|R90037, gb|AI994125 come from this gene
[Arabidopsis thaliana]
Length = 1153
Score = 367 bits (943), Expect = 2e-99
Identities = 185/382 (48%), Positives = 251/382 (65%), Gaps = 5/382 (1%)
Frame = +1
Query: 22 EGNINTKIGRVTEMHNLSQFRSLTL-HSAEQNKVARLTFTHSGKGIILLSMNGTHQCWRW 198
E N +KI ++TE+ SQ RSL L + K++RL FT+SG I+ L+ N H W+W
Sbjct: 760 ESNDKSKIWKLTEVSEPSQCRSLRLPENLRVAKISRLIFTNSGNAILALASNAIHLLWKW 819
Query: 199 KNTDINVEGKVTTEYHPYIWKSEAGLMMINDITNVQTEEASHCFALSNSDSYLISTSGGP 378
+ + N GK T P W+ +G++M ND+ EEA CFALS +DSY++S SGG
Sbjct: 820 QRNERNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGK 879
Query: 379 LTLFNVVTWQAVTDVMRPPPLVTCVAFNPQDNNLVTVGMNDSSIQMYDFRVQEFKVKAVG 558
++LFN++T++ + M PPP T +AF+PQDNN++ +GM+DS+IQ+Y+ RV E K K G
Sbjct: 880 ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKG 939
Query: 559 HCRKITGLAFSLELNILVSAAADAEIIVWSLDTWVRQRSTYLQIPNARVRARLSDTEVQF 738
H ++ITGLAFS LN+LVS+ ADA++ VW+ D W +QRS L +P R + SDT VQF
Sbjct: 940 HSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDTRVQF 999
Query: 739 HTDQKHFLAIHETQLALYETSKLIRIKQWTRAAHLSVLVSAAFSCDSQLVYACFRDGLLG 918
H DQ HFL +HETQLA+YET+KL +KQW L+ + A FSCDSQLVYA F D +
Sbjct: 1000 HQDQAHFLVVHETQLAIYETTKLECMKQWAVRESLAPITHATFSCDSQLVYASFMDATVC 1059
Query: 919 VFSTSTFELQCVVHPMAYIPESL-RGRIYPTAIASNPNAVNQFAVGLSDGRVILLEPLET 1095
VFS++ L+C V+P AY+P SL ++P IA++P N FAVGLSDG V + EPLE+
Sbjct: 1060 VFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLES 1119
Query: 1096 ESEWG---RVERG*RSYAPAAP 1152
E +WG E G S AP AP
Sbjct: 1120 EGKWGVAPPAENGSASGAPTAP 1141