BLASTX nr result

ID: Panax21_contig00034234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034234
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263883.2| PREDICTED: F-box/kelch-repeat protein At1g23...   152   4e-35
emb|CAN70447.1| hypothetical protein VITISV_017946 [Vitis vinifera]   152   4e-35
gb|ACW82829.1| F-box/kelch protein [Vitis vinifera]                   150   1e-34
ref|XP_002525399.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|XP_003530637.1| PREDICTED: F-box/kelch-repeat protein At1g23...   132   4e-29

>ref|XP_002263883.2| PREDICTED: F-box/kelch-repeat protein At1g23390 [Vitis vinifera]
          Length = 391

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/116 (66%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +1

Query: 202 KEAPIYGDVLELILSHVPLNDLVLASHVSKSWNRGVSSSLRHFNEPKPWLLVHTQASRPP 381
           +EAPIYGDVLELILSHVPL DL  A  VS  W   VSSSL HFN  KPWL+VHTQ +R P
Sbjct: 26  EEAPIYGDVLELILSHVPLVDLAHACLVSNPWKHAVSSSLSHFNRLKPWLVVHTQTTRSP 85

Query: 382 YATTSHAYDHRSNA*IQINRSSINYVSALRSFHSD-LYMLSPWKFSFSFDPLHLTW 546
           Y TT+HAYD RS   + + +  I YVSALRS HS  LYMLSP K SFS+DPLHL W
Sbjct: 86  YVTTTHAYDPRSQLWLHLKQPPIRYVSALRSSHSTLLYMLSPSKLSFSYDPLHLAW 141


>emb|CAN70447.1| hypothetical protein VITISV_017946 [Vitis vinifera]
          Length = 541

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/116 (66%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +1

Query: 202 KEAPIYGDVLELILSHVPLNDLVLASHVSKSWNRGVSSSLRHFNEPKPWLLVHTQASRPP 381
           +EAPIYGDVLELILSHVPL DL  A  VS  W   VSSSL HFN  KPWL+VHTQ +R P
Sbjct: 26  EEAPIYGDVLELILSHVPLVDLAHACLVSNPWKHAVSSSLSHFNRLKPWLVVHTQTTRSP 85

Query: 382 YATTSHAYDHRSNA*IQINRSSINYVSALRSFHSD-LYMLSPWKFSFSFDPLHLTW 546
           Y TT+HAYD RS   + + +  I YVSALRS HS  LYMLSP K SFS+DPLHL W
Sbjct: 86  YVTTTHAYDPRSQLWLHLKQPPIRYVSALRSSHSTLLYMLSPSKLSFSYDPLHLAW 141


>gb|ACW82829.1| F-box/kelch protein [Vitis vinifera]
          Length = 386

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/117 (64%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
 Frame = +1

Query: 199 QKEAPIYGDVLELILSHVPLNDLVLASHVSKSWNRGVSSSLRHFNEPKPWLLVHTQASRP 378
           ++EAPIYGDVLELILSHVPL DL  A  VS  W   VSSSL HFN  KPWL+VHTQ +R 
Sbjct: 20  EEEAPIYGDVLELILSHVPLVDLAHACLVSNPWEHAVSSSLSHFNRLKPWLVVHTQTTRS 79

Query: 379 PYATTSHAYDHRSNA*IQINRSSINYVSALRSFHSD-LYMLSPWKFSFSFDPLHLTW 546
           PY  T+HAYD RS   + + +  I YVSALRS HS  LYMLSP K SFS+DPLHL W
Sbjct: 80  PYVITTHAYDPRSQLWLHLKQPPIRYVSALRSSHSTLLYMLSPSKLSFSYDPLHLAW 136


>ref|XP_002525399.1| conserved hypothetical protein [Ricinus communis]
           gi|223535362|gb|EEF37037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 381

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/117 (57%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +1

Query: 199 QKEAPIYGDVLELILSHVPLNDLVLASHVSKSWNRGVSSSLRHFNEPKPWLLVHTQASRP 378
           Q+++ I+GD+LE I++ VPL DL+    VS SWNR V +SL  FN  KPWL++HTQA+R 
Sbjct: 14  QEQSTIHGDILESIVTRVPLIDLLSTFQVSISWNRAVLTSLHRFNRIKPWLILHTQATRS 73

Query: 379 PYATTSHAYDHRSNA*IQINRSSINYVSALRSFHSD-LYMLSPWKFSFSFDPLHLTW 546
           PY+T +HAYD RS+  +Q+ +  I+Y+SALRS HS  LYMLSP  FSFSFDP+HL W
Sbjct: 74  PYSTAAHAYDPRSDVWVQVQQPPISYISALRSSHSTLLYMLSPSNFSFSFDPMHLMW 130


>ref|XP_003530637.1| PREDICTED: F-box/kelch-repeat protein At1g23390-like [Glycine max]
          Length = 384

 Score =  132 bits (332), Expect = 4e-29
 Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = +1

Query: 199 QKEAPIYGDVLELILSHVPLNDLVLASHVSKSWNRGVSSSLRHFNEPKPWLLVHTQASRP 378
           ++EAP++ D+LE I SHVPL  LV ASHVS SW R VS+SLRH    KPWL VHTQ+ R 
Sbjct: 10  EEEAPMHVDILEAIFSHVPLIHLVPASHVSNSWKRAVSTSLRHVKPAKPWLTVHTQSPRA 69

Query: 379 PYATTSHAYDHRSNA*IQINRSSINYVSALRSFHSD-LYMLSPWKFSFSFDPLHLTW 546
           P+ TT+ AYD RS    QI+  S N+ +ALRS HS  LY LSP +F+FS DPL L W
Sbjct: 70  PHVTTTFAYDPRSREWFQIHAPSPNHTTALRSSHSTLLYTLSPREFTFSLDPLKLAW 126


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