BLASTX nr result

ID: Panax21_contig00034230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034230
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002335750.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002330897.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266...    61   1e-07
emb|CBI16366.3| unnamed protein product [Vitis vinifera]               59   4e-07

>ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|222849874|gb|EEE87421.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/45 (77%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   SNIFSKNTPMRSFSFKTARSVSIRRIMAALSDLPAGGELSPPSSK 136
           SNIFSK    RS SFKTARSVSIRRI+A L DLP GGELSP SSK
Sbjct: 30  SNIFSKTNDKRSSSFKTARSVSIRRILAVLQDLPPGGELSPASSK 74


>ref|XP_002335750.1| predicted protein [Populus trichocarpa] gi|222834668|gb|EEE73131.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/45 (77%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   SNIFSKNTPMRSFSFKTARSVSIRRIMAALSDLPAGGELSPPSSK 136
           SNIFSK    RS SFKTARSVSIRRI+A L DLP GGELSP SSK
Sbjct: 23  SNIFSKTNDKRSSSFKTARSVSIRRILAVLQDLPPGGELSPASSK 67


>ref|XP_002330897.1| predicted protein [Populus trichocarpa] gi|222872719|gb|EEF09850.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   SNIFSK-NTPMRSFSFKTARSVSIRRIMAALSDLPAGGELSPPSSK 136
           SNIFSK +   RS SFK ARSVSI+RI+AAL DLPAGGELSP SSK
Sbjct: 32  SNIFSKTHRERRSSSFKIARSVSIQRILAALQDLPAGGELSPASSK 77


>ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266637 [Vitis vinifera]
          Length = 95

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   SNIFSKNTPMRSFSFKTARSVSIRRIMAALSDLPAGGELSP-PSSK 136
           SNIFSKN P RS  FK ARSVSIRR++A L+DLP GGELSP PS K
Sbjct: 32  SNIFSKN-PKRSHRFKPARSVSIRRVLACLADLPPGGELSPSPSPK 76


>emb|CBI16366.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +2

Query: 2   SNIFSKNTPMRSFSFKTARSVSIRRIMAALSDLPAGGELSPPSSK 136
           S++FSKN  MRS SFK ARS SIRRI+A +SDLPAGGE+S  SS+
Sbjct: 58  SDVFSKNK-MRSLSFKPARSASIRRILAVISDLPAGGEVSSRSSR 101


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