BLASTX nr result

ID: Panax21_contig00034226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034226
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   178   5e-43
emb|CBI33150.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...   159   3e-37
ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ...   157   6e-37

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/119 (73%), Positives = 104/119 (87%)
 Frame = +3

Query: 3    ILMKSIQRETGTYILFDRQSLNIRVFGSSDKIDVVQQKLVQSLSILHESKQLEVHLRGGV 182
            +LMKS+QRET TYILFDR S+++RVFG S+KI V +QKLV+SL  LH+SKQLE+HLRGG 
Sbjct: 1401 MLMKSLQRETETYILFDRHSISVRVFGPSEKIAVAKQKLVESLLALHDSKQLEIHLRGGD 1460

Query: 183  LPPNLMKKVVKSFGPDLHGLKEKVPEAEFTLNTRYHFISIHGSKQVKQKVEKIIYEIAQ 359
            LP +LMK+VVK FGPDLHGLKEKVP AEFTLNTR H I IHG+K++KQKV+ I+YEIAQ
Sbjct: 1461 LPGDLMKEVVKKFGPDLHGLKEKVPGAEFTLNTRRHIIYIHGNKELKQKVQDIVYEIAQ 1519


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/119 (73%), Positives = 104/119 (87%)
 Frame = +3

Query: 3    ILMKSIQRETGTYILFDRQSLNIRVFGSSDKIDVVQQKLVQSLSILHESKQLEVHLRGGV 182
            +LMKS+QRET TYILFDR S+++RVFG S+KI V +QKLV+SL  LH+SKQLE+HLRGG 
Sbjct: 1401 MLMKSLQRETETYILFDRHSISVRVFGPSEKIAVAKQKLVESLLALHDSKQLEIHLRGGD 1460

Query: 183  LPPNLMKKVVKSFGPDLHGLKEKVPEAEFTLNTRYHFISIHGSKQVKQKVEKIIYEIAQ 359
            LP +LMK+VVK FGPDLHGLKEKVP AEFTLNTR H I IHG+K++KQKV+ I+YEIAQ
Sbjct: 1461 LPGDLMKEVVKKFGPDLHGLKEKVPGAEFTLNTRRHIIYIHGNKELKQKVQDIVYEIAQ 1519


>ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|222856516|gb|EEE94063.1|
            predicted protein [Populus trichocarpa]
          Length = 1743

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/118 (68%), Positives = 99/118 (83%)
 Frame = +3

Query: 6    LMKSIQRETGTYILFDRQSLNIRVFGSSDKIDVVQQKLVQSLSILHESKQLEVHLRGGVL 185
            LMKSIQRETGTYI FDR++ N+++FG  DKI   QQK +Q L   HESKQLE+HLRGG L
Sbjct: 1402 LMKSIQRETGTYIHFDRRNFNLKIFGRPDKIAPAQQKFIQLLLANHESKQLEIHLRGGDL 1461

Query: 186  PPNLMKKVVKSFGPDLHGLKEKVPEAEFTLNTRYHFISIHGSKQVKQKVEKIIYEIAQ 359
            PP+LMK+VVK FGPDLHGLKEKVP A+ TL+TR+H IS+HG K++KQ VE+II+E+AQ
Sbjct: 1462 PPDLMKEVVKRFGPDLHGLKEKVPGADLTLSTRHHVISVHGDKELKQNVEEIIFEMAQ 1519


>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1736

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/118 (61%), Positives = 99/118 (83%)
 Frame = +3

Query: 6    LMKSIQRETGTYILFDRQSLNIRVFGSSDKIDVVQQKLVQSLSILHESKQLEVHLRGGVL 185
            L  S+Q+ETGTYILFDR +LN+RVFGS +K+ + Q+K++QSL  LHE KQLE+HLRG  L
Sbjct: 1395 LKNSLQQETGTYILFDRHNLNLRVFGSPNKVALAQEKVIQSLLSLHEEKQLEIHLRGMDL 1454

Query: 186  PPNLMKKVVKSFGPDLHGLKEKVPEAEFTLNTRYHFISIHGSKQVKQKVEKIIYEIAQ 359
            PP+LMK+++K+FGPDL GLKE+VP  + TLNTR H + +HGSK++K +VE+II+EIA+
Sbjct: 1455 PPDLMKQMIKNFGPDLRGLKERVPGVDLTLNTRRHIVILHGSKELKPRVEEIIFEIAR 1512


>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1729

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/118 (61%), Positives = 98/118 (83%)
 Frame = +3

Query: 6    LMKSIQRETGTYILFDRQSLNIRVFGSSDKIDVVQQKLVQSLSILHESKQLEVHLRGGVL 185
            L  S+Q+ETGTYILFDR +LN+RVFGS + + + Q+K++QSL  LHE KQLE+HLRG  L
Sbjct: 1389 LKNSLQQETGTYILFDRHNLNLRVFGSPNMVALAQEKVIQSLLSLHEEKQLEIHLRGRDL 1448

Query: 186  PPNLMKKVVKSFGPDLHGLKEKVPEAEFTLNTRYHFISIHGSKQVKQKVEKIIYEIAQ 359
            PP+LMK+++K+FGPDLHGLKE+VP  + TLN R H I +HGSK++K +VE+I++EIA+
Sbjct: 1449 PPDLMKQMIKNFGPDLHGLKERVPGVDLTLNIRRHIIILHGSKELKPRVEEIVFEIAR 1506


Top