BLASTX nr result

ID: Panax21_contig00034203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034203
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268646.1| PREDICTED: 50S ribosomal protein L15 [Vitis ...   313   2e-83
ref|XP_002298658.1| predicted protein [Populus trichocarpa] gi|2...   302   7e-80
ref|XP_002455499.1| hypothetical protein SORBIDRAFT_03g012270 [S...   301   2e-79
ref|XP_002522195.1| 60S ribosomal protein L10, mitochondrial, pu...   300   2e-79
ref|XP_002329967.1| predicted protein [Populus trichocarpa] gi|2...   299   6e-79

>ref|XP_002268646.1| PREDICTED: 50S ribosomal protein L15 [Vitis vinifera]
           gi|296085970|emb|CBI31411.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score =  313 bits (803), Expect = 2e-83
 Identities = 156/183 (85%), Positives = 164/183 (89%)
 Frame = -3

Query: 778 HKGQKARGTHKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 599
           HKGQKARGT KFGFEGGQTPLRRR+PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL
Sbjct: 100 HKGQKARGTMKFGFEGGQTPLRRRMPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 159

Query: 598 ITMKTLKEAGAIGKQIRDGVRLMGRGAEHIQWPIHLEVTRVTVRAKAAIEAAGGSVRKVY 419
           ITMKTLK+AGAIGKQI+DGVRLMGRGA+ I+WPIH EV+RVTVRAK A+EAAGGSVR+VY
Sbjct: 160 ITMKTLKDAGAIGKQIKDGVRLMGRGADEIKWPIHFEVSRVTVRAKEAVEAAGGSVRRVY 219

Query: 418 YNKLGFQALLKPEWFEKKGXXXXXXXXXXPKQADKVDSIGRLPAPTKPIPFTPEEKEAMS 239
           YNKLGFQALLKPEWFEKKG          PKQ DKVDSIGRLPAPTKPIPF PEEKEA  
Sbjct: 220 YNKLGFQALLKPEWFEKKGRLLPKAARPPPKQRDKVDSIGRLPAPTKPIPFLPEEKEAAF 279

Query: 238 APS 230
            PS
Sbjct: 280 TPS 282


>ref|XP_002298658.1| predicted protein [Populus trichocarpa] gi|222845916|gb|EEE83463.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  302 bits (773), Expect = 7e-80
 Identities = 152/182 (83%), Positives = 160/182 (87%)
 Frame = -3

Query: 778 HKGQKARGTHKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 599
           HKGQKARGT KFGFEGGQTP+RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDS EL
Sbjct: 46  HKGQKARGTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSHEL 105

Query: 598 ITMKTLKEAGAIGKQIRDGVRLMGRGAEHIQWPIHLEVTRVTVRAKAAIEAAGGSVRKVY 419
           ITMK LK+  AIGKQI+DGVRLMGRGAE IQWPIHLEV+RVTVRAK A+EAAGGSVR+V+
Sbjct: 106 ITMKILKDTAAIGKQIKDGVRLMGRGAEKIQWPIHLEVSRVTVRAKEAVEAAGGSVRRVH 165

Query: 418 YNKLGFQALLKPEWFEKKGXXXXXXXXXXPKQADKVDSIGRLPAPTKPIPFTPEEKEAMS 239
           YNKLGF+ALLKPEWFEKKG          PK  DKVDSIGRLPAPTKPIPF  EEKEA S
Sbjct: 166 YNKLGFRALLKPEWFEKKGRLLPKAARPPPKLKDKVDSIGRLPAPTKPIPFYTEEKEAAS 225

Query: 238 AP 233
           AP
Sbjct: 226 AP 227


>ref|XP_002455499.1| hypothetical protein SORBIDRAFT_03g012270 [Sorghum bicolor]
           gi|241927474|gb|EES00619.1| hypothetical protein
           SORBIDRAFT_03g012270 [Sorghum bicolor]
          Length = 292

 Score =  301 bits (770), Expect = 2e-79
 Identities = 148/177 (83%), Positives = 158/177 (89%)
 Frame = -3

Query: 778 HKGQKARGTHKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 599
           HKGQKARGT +FGFEGGQTPLRRRLP+RGFKNPFSLTFQP GLGKIAKLINAGKIDSSEL
Sbjct: 102 HKGQKARGTARFGFEGGQTPLRRRLPRRGFKNPFSLTFQPCGLGKIAKLINAGKIDSSEL 161

Query: 598 ITMKTLKEAGAIGKQIRDGVRLMGRGAEHIQWPIHLEVTRVTVRAKAAIEAAGGSVRKVY 419
           ITMKTLKE GAIGKQI+DG+RLMGRGAE I+WPIHLEV+R T RAKAA+EAAGG+VR VY
Sbjct: 162 ITMKTLKETGAIGKQIKDGIRLMGRGAEEIKWPIHLEVSRATARAKAAVEAAGGTVRLVY 221

Query: 418 YNKLGFQALLKPEWFEKKGXXXXXXXXXXPKQADKVDSIGRLPAPTKPIPFTPEEKE 248
           YNKLGF+ALLKPEWFEKKG          PKQ DKVDSIGRLPAPTKP+PFTPEE E
Sbjct: 222 YNKLGFRALLKPEWFEKKGRLLPKAARPPPKQRDKVDSIGRLPAPTKPLPFTPEELE 278


>ref|XP_002522195.1| 60S ribosomal protein L10, mitochondrial, putative [Ricinus
           communis] gi|223538566|gb|EEF40170.1| 60S ribosomal
           protein L10, mitochondrial, putative [Ricinus communis]
          Length = 275

 Score =  300 bits (769), Expect = 2e-79
 Identities = 150/183 (81%), Positives = 160/183 (87%)
 Frame = -3

Query: 778 HKGQKARGTHKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 599
           HKGQKARGT KFGFEGGQTP+RRRLPKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS EL
Sbjct: 93  HKGQKARGTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHEL 152

Query: 598 ITMKTLKEAGAIGKQIRDGVRLMGRGAEHIQWPIHLEVTRVTVRAKAAIEAAGGSVRKVY 419
           ITMKTLKE GAIGKQI DGVRLMGRGA+ I+WPIHLEVTRVTVRAK A+EAAGGSVR+V+
Sbjct: 153 ITMKTLKETGAIGKQIEDGVRLMGRGADQIKWPIHLEVTRVTVRAKQAVEAAGGSVRRVH 212

Query: 418 YNKLGFQALLKPEWFEKKGXXXXXXXXXXPKQADKVDSIGRLPAPTKPIPFTPEEKEAMS 239
           YNKLG +ALLKPEWFEKKG          PK  DKVDSIGRLPAPTKPIPF  E+KEA+S
Sbjct: 213 YNKLGLRALLKPEWFEKKGRLLPKPARPPPKLKDKVDSIGRLPAPTKPIPFYAEDKEAVS 272

Query: 238 APS 230
            P+
Sbjct: 273 TPA 275


>ref|XP_002329967.1| predicted protein [Populus trichocarpa] gi|222871989|gb|EEF09120.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  299 bits (765), Expect = 6e-79
 Identities = 150/183 (81%), Positives = 160/183 (87%)
 Frame = -3

Query: 778 HKGQKARGTHKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSEL 599
           HKGQKARGT KFGFEGGQTP+RRRLPKRGFKNPFSLTFQPVGLGKIA+LINAGKIDS EL
Sbjct: 42  HKGQKARGTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIARLINAGKIDSHEL 101

Query: 598 ITMKTLKEAGAIGKQIRDGVRLMGRGAEHIQWPIHLEVTRVTVRAKAAIEAAGGSVRKVY 419
           ITMKTLKE GAIGKQI+DGVRLMGRGAE IQWPIHLEV+RVTVRAK A+EAAGGSVR+V+
Sbjct: 102 ITMKTLKETGAIGKQIKDGVRLMGRGAEKIQWPIHLEVSRVTVRAKQAVEAAGGSVRRVH 161

Query: 418 YNKLGFQALLKPEWFEKKGXXXXXXXXXXPKQADKVDSIGRLPAPTKPIPFTPEEKEAMS 239
           YN+LG +ALLKPEWFEKKG          PK   KVDSIGRLPAPTKPIPF  EEKEA S
Sbjct: 162 YNQLGLRALLKPEWFEKKGRLLPKAARPPPKLRGKVDSIGRLPAPTKPIPFYTEEKEAAS 221

Query: 238 APS 230
            P+
Sbjct: 222 TPA 224


Top