BLASTX nr result

ID: Panax21_contig00034188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034188
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...    56   3e-06

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 247 VKSEPFLRANFVTKMPTAPWMKGPFLLEPNQVLDLSKSR 363
           + S+P    +   KMPTAPWMKGP LL+PN+VLDLSK+R
Sbjct: 61  ISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKAR 99


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