BLASTX nr result

ID: Panax21_contig00034183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034183
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus ...   171   9e-41
ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247...   170   2e-40
ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258...   166   3e-39
ref|XP_002525648.1| ubiquitin-protein ligase, putative [Ricinus ...   159   2e-37
ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33

>ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532481|gb|EEF34271.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 460

 Score =  171 bits (432), Expect = 9e-41
 Identities = 86/182 (47%), Positives = 125/182 (68%)
 Frame = +1

Query: 1   LLLLLCFTFISVSIVLVLGVYGSLTLRLGSNCSLLIKANPVLVKYLKVKQFDHTINGSRL 180
           ++++L F F  VS+ L+LGVYG +++ +G N S LI+ NP  V+ +KV++ D    G  L
Sbjct: 74  IIVVLTFWFF-VSMTLILGVYGPVSVMIGPNTSALIRTNPFFVQSIKVQELDSNHPGLML 132

Query: 181 YGFYKDPPLDVLISSSELHSTSLPAKSQKDWIYFLNEGSQLNIYAXXXXXXXXXXXXXIA 360
           YGFYK PPL+V+ S S+ +S ++PA S K+WIY+ NEGSQ+NI               + 
Sbjct: 133 YGFYKTPPLNVVKSWSKSYSLTVPADSHKEWIYYFNEGSQINI---SFSVYSPSASLFLV 189

Query: 361 DAEGIDGLVQWLDDTSYSNTTFSWNILHGNGMIQQDITKSSNYYVSVANLNSEILEIQLN 540
            A+G +GL QWL+D +Y N+T SWN++ G+G+IQQ I KSS+YYV+V NLNS  +E+QLN
Sbjct: 190 IAQGSEGLSQWLEDPTYPNSTSSWNVIQGSGIIQQKIRKSSSYYVAVGNLNSVEVEVQLN 249

Query: 541 LT 546
           L+
Sbjct: 250 LS 251


>ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247198 [Vitis vinifera]
           gi|296083155|emb|CBI22791.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/182 (46%), Positives = 120/182 (65%)
 Frame = +1

Query: 1   LLLLLCFTFISVSIVLVLGVYGSLTLRLGSNCSLLIKANPVLVKYLKVKQFDHTINGSRL 180
           ++++L F F  VS+ L+LGVYGS+ +RLG NCS+L+  NP+ V+YLKV++ D    G  L
Sbjct: 92  IIVVLTFWFF-VSMTLILGVYGSVNMRLGPNCSILLHPNPLFVQYLKVEELDEPTPGPML 150

Query: 181 YGFYKDPPLDVLISSSELHSTSLPAKSQKDWIYFLNEGSQLNIYAXXXXXXXXXXXXXIA 360
           YGFYK PPL+V+ +  +         S ++W+Y+LN+GSQ+NI               I 
Sbjct: 151 YGFYKVPPLEVITTWDQKLKAYTAPYSHREWVYYLNKGSQVNITYSVSSLSSSSLILVI- 209

Query: 361 DAEGIDGLVQWLDDTSYSNTTFSWNILHGNGMIQQDITKSSNYYVSVANLNSEILEIQLN 540
            A+G +GL QWL+D +Y N T SW ++HGNG +QQ+I  SS+YYV+V N N E +E+QLN
Sbjct: 210 -AQGNEGLSQWLEDPTYPNITLSWQLIHGNGTVQQNIYTSSSYYVAVGNTNLEEVEVQLN 268

Query: 541 LT 546
           LT
Sbjct: 269 LT 270


>ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258653 [Vitis vinifera]
           gi|297745897|emb|CBI15953.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  166 bits (419), Expect = 3e-39
 Identities = 85/182 (46%), Positives = 122/182 (67%)
 Frame = +1

Query: 1   LLLLLCFTFISVSIVLVLGVYGSLTLRLGSNCSLLIKANPVLVKYLKVKQFDHTINGSRL 180
           L++L+ F F + S+ L+LG YGS  ++LG +CS L+KAN   V+ +KV++ D    G  L
Sbjct: 96  LVVLVTFWFFA-SMALILGFYGSANVQLGPHCSRLVKANSFFVQTIKVQEIDEPKPGPML 154

Query: 181 YGFYKDPPLDVLISSSELHSTSLPAKSQKDWIYFLNEGSQLNIYAXXXXXXXXXXXXXIA 360
           YGFY+ PPLDV  +  E H  S+ A   K+WI+FLN+GS+++I               I 
Sbjct: 155 YGFYEPPPLDVENTWFETHDASVEANFHKEWIFFLNKGSKVDISYSVKAPRSSPLSLVI- 213

Query: 361 DAEGIDGLVQWLDDTSYSNTTFSWNILHGNGMIQQDITKSSNYYVSVANLNSEILEIQLN 540
            A+G + LV+W++D SY NTT SWNI++G+G +QQ+I KSS YYV+V NLNSE +++QLN
Sbjct: 214 -AQGRESLVEWIEDPSYPNTTLSWNIIYGSGKVQQEIFKSSYYYVAVGNLNSEEVKVQLN 272

Query: 541 LT 546
           LT
Sbjct: 273 LT 274


>ref|XP_002525648.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535084|gb|EEF36766.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 502

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/179 (45%), Positives = 120/179 (67%)
 Frame = +1

Query: 1   LLLLLCFTFISVSIVLVLGVYGSLTLRLGSNCSLLIKANPVLVKYLKVKQFDHTINGSRL 180
           L++L+ F F + S+ L+LG YGS+ L LG NCS LIK NP+ V+ +KV++ D   +G  L
Sbjct: 122 LVVLVTFWFFA-SMTLILGFYGSVNLELGPNCSYLIKTNPLFVQSIKVEEVDEPKHGPML 180

Query: 181 YGFYKDPPLDVLISSSELHSTSLPAKSQKDWIYFLNEGSQLNIYAXXXXXXXXXXXXXIA 360
           YGF+K PP+DV  + +E H   +    Q +W YFLN+GS++ I+              IA
Sbjct: 181 YGFHKPPPMDVETTWTETHKALILPHLQ-EWAYFLNKGSKVAIFYTIKSPSSSPLSLVIA 239

Query: 361 DAEGIDGLVQWLDDTSYSNTTFSWNILHGNGMIQQDITKSSNYYVSVANLNSEILEIQL 537
             +G D LV+W+D+ SY N+T SWNI+ G+G I+Q+I++SSNYY++V NLNSE +E++L
Sbjct: 240 --QGRDSLVEWIDEPSYPNSTLSWNIIFGSGKIEQEISESSNYYIAVGNLNSEDVEVEL 296


>ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|222847066|gb|EEE84613.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  145 bits (366), Expect = 4e-33
 Identities = 75/179 (41%), Positives = 114/179 (63%)
 Frame = +1

Query: 1   LLLLLCFTFISVSIVLVLGVYGSLTLRLGSNCSLLIKANPVLVKYLKVKQFDHTINGSRL 180
           L +L+ F F + S+ ++LG YGS++L LG NCS L++ NP+ V+ LK  +      G  L
Sbjct: 19  LAVLIAFWFFA-SLTIILGYYGSVSLELGPNCSRLVQPNPLFVQSLKAGELGKPKPGPIL 77

Query: 181 YGFYKDPPLDVLISSSELHSTSLPAKSQKDWIYFLNEGSQLNIYAXXXXXXXXXXXXXIA 360
           YGFYK PPLDV I+ ++ H       + ++W  FLN+GS+++I               IA
Sbjct: 78  YGFYKPPPLDVEITWTQQHD------AVQEWALFLNKGSKVDISYSIKSLGATPLSLVIA 131

Query: 361 DAEGIDGLVQWLDDTSYSNTTFSWNILHGNGMIQQDITKSSNYYVSVANLNSEILEIQL 537
             +G + L++W+DD SY NTT SWNI++G+G IQQ+I  SS+YY++V N NSE ++++L
Sbjct: 132 --QGTESLIEWIDDPSYPNTTLSWNIINGSGNIQQEIPTSSSYYIAVGNFNSEEVKVEL 188


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