BLASTX nr result

ID: Panax21_contig00034171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034171
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256...   177   1e-42
ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_003520208.1| PREDICTED: uncharacterized protein LOC100785...   171   7e-41
ref|XP_002520749.1| conserved hypothetical protein [Ricinus comm...   169   2e-40
ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   168   4e-40

>ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256371 [Vitis vinifera]
           gi|296086702|emb|CBI32337.3| unnamed protein product
           [Vitis vinifera]
          Length = 926

 Score =  177 bits (448), Expect = 1e-42
 Identities = 91/121 (75%), Positives = 109/121 (90%)
 Frame = -3

Query: 365 QPRTLFPGGYKRPEIKVPNLVLQLRPEEVLADNKAALDSIDAAVSKNFVGIVVLSGGEGS 186
           QPRT++PGGYKRPEI+VP+LVLQL  +EVL D    LD +D AVSK +VG+VVL GG+GS
Sbjct: 67  QPRTVYPGGYKRPEIRVPSLVLQLSVDEVL-DRAGVLDVVDEAVSK-WVGVVVLDGGDGS 124

Query: 185 GGKLYEAACLLKSVIRDRAYLLLAERVDIAAAVNASGVVLSDQGLPAIVARNTMIDTRFE 6
           GG+LYEAACLLKSV+R+RAYL++AERVDIAAAVNA+GVVLSD+GLPAIVARNTM+D+R E
Sbjct: 125 GGRLYEAACLLKSVVRERAYLMVAERVDIAAAVNANGVVLSDKGLPAIVARNTMMDSRSE 184

Query: 5   S 3
           S
Sbjct: 185 S 185


>ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|222857029|gb|EEE94576.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  171 bits (434), Expect = 4e-41
 Identities = 92/127 (72%), Positives = 104/127 (81%), Gaps = 3/127 (2%)
 Frame = -3

Query: 374 SQPQPRTLFPGGYKRPEIKVPNLVLQLRPEEVLADNKAALDSIDAAVSKNFVGIVVLSG- 198
           S  QPRTLFPGGYKRPEIKVPN+VLQL PE+V+     ALD ID AVSK+ VGIV+L+G 
Sbjct: 1   SNQQPRTLFPGGYKRPEIKVPNIVLQLDPEDVIRGGSEALDLIDKAVSKS-VGIVILNGS 59

Query: 197 --GEGSGGKLYEAACLLKSVIRDRAYLLLAERVDIAAAVNASGVVLSDQGLPAIVARNTM 24
             G GSG  LYEAACL+ SV+RDRAYLL+ ERVDIA AVNASGVVLSDQGLPA+VARN M
Sbjct: 60  IGGGGSGKSLYEAACLVNSVVRDRAYLLIGERVDIATAVNASGVVLSDQGLPALVARNMM 119

Query: 23  IDTRFES 3
           + +R ES
Sbjct: 120 MGSRTES 126


>ref|XP_003520208.1| PREDICTED: uncharacterized protein LOC100785233 [Glycine max]
          Length = 914

 Score =  171 bits (432), Expect = 7e-41
 Identities = 90/121 (74%), Positives = 103/121 (85%)
 Frame = -3

Query: 368 PQPRTLFPGGYKRPEIKVPNLVLQLRPEEVLADNKAALDSIDAAVSKNFVGIVVLSGGEG 189
           PQPRTLFPGGYKRPE+KVP LVLQL P EVL+ +  AL  ID AVSK +VGIVVL+  E 
Sbjct: 61  PQPRTLFPGGYKRPELKVPTLVLQLDPAEVLSADTDALALIDRAVSK-WVGIVVLASNEA 119

Query: 188 SGGKLYEAACLLKSVIRDRAYLLLAERVDIAAAVNASGVVLSDQGLPAIVARNTMIDTRF 9
           SGGKLYEAAC LKS+I+DRAYLL+AERVDIAAA  ASGV+LSDQGLP +VARNTM+D++ 
Sbjct: 120 SGGKLYEAACSLKSLIQDRAYLLVAERVDIAAATAASGVLLSDQGLPTVVARNTMLDSKS 179

Query: 8   E 6
           E
Sbjct: 180 E 180


>ref|XP_002520749.1| conserved hypothetical protein [Ricinus communis]
           gi|223540134|gb|EEF41711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 921

 Score =  169 bits (428), Expect = 2e-40
 Identities = 93/139 (66%), Positives = 110/139 (79%), Gaps = 7/139 (5%)
 Frame = -3

Query: 398 NPFSSNI-------QSQPQPRTLFPGGYKRPEIKVPNLVLQLRPEEVLADNKAALDSIDA 240
           NPF  +I       QSQ  PRTLFPGGYKRPEIKVP++VLQL P++VL D   ALD +D 
Sbjct: 44  NPFHQSINQSLPTQQSQQSPRTLFPGGYKRPEIKVPSIVLQLYPDDVLRDG--ALDFLDK 101

Query: 239 AVSKNFVGIVVLSGGEGSGGKLYEAACLLKSVIRDRAYLLLAERVDIAAAVNASGVVLSD 60
           A+SK +VGIVVL+G + +G  LYEAACLLKSV++DR Y L+ ERVDIAAAVNASGVVLSD
Sbjct: 102 ALSK-WVGIVVLNGADVTGKTLYEAACLLKSVVKDRVYFLIGERVDIAAAVNASGVVLSD 160

Query: 59  QGLPAIVARNTMIDTRFES 3
           QGLP+IVARN M D++ ES
Sbjct: 161 QGLPSIVARNMMRDSKSES 179


>ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101213431
           [Cucumis sativus]
          Length = 924

 Score =  168 bits (426), Expect = 4e-40
 Identities = 94/137 (68%), Positives = 108/137 (78%), Gaps = 5/137 (3%)
 Frame = -3

Query: 398 NPFSSN-----IQSQPQPRTLFPGGYKRPEIKVPNLVLQLRPEEVLADNKAALDSIDAAV 234
           NPF S+        +PQPRTLFP G+KRPEIKVP +VLQL   EVLA + A LD +D AV
Sbjct: 52  NPFQSSQSIPKTPEKPQPRTLFPSGFKRPEIKVPCVVLQLDAAEVLAGDDA-LDLVDRAV 110

Query: 233 SKNFVGIVVLSGGEGSGGKLYEAACLLKSVIRDRAYLLLAERVDIAAAVNASGVVLSDQG 54
           SK +VGIVVL+ GEG GGKLYEAAC LKS++ DRAYLL+AERVDIA AV ASGVVLSDQG
Sbjct: 111 SK-WVGIVVLNSGEGGGGKLYEAACKLKSLVGDRAYLLIAERVDIATAVGASGVVLSDQG 169

Query: 53  LPAIVARNTMIDTRFES 3
           LP IVARNTM+D+  +S
Sbjct: 170 LPPIVARNTMLDSTSDS 186


Top