BLASTX nr result
ID: Panax21_contig00034156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00034156
(465 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-27
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] 78 1e-26
ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containi... 78 3e-26
ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containi... 81 3e-26
ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containi... 78 3e-26
>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 80.1 bits (196), Expect(3) = 3e-27
Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -3
Query: 367 YIQAGDMEKALESLRKSEHLIRAKTR-LPYEVLLTLYARVGNKDEVYRIWXXXXXXXXXX 191
Y++A EKA+E L+KSE I ++R YE+LLTLYA +GNK EVYRIW
Sbjct: 251 YLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYRIWNLYKTIGKFF 310
Query: 190 NASYLCMISSLAILDDLDGAEK 125
N Y+ M+SSL LDD+DGAEK
Sbjct: 311 NTGYVAMVSSLLKLDDMDGAEK 332
Score = 48.9 bits (115), Expect(3) = 3e-27
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2
Query: 128 EAESFVQRLIESGKEPNACTWSRLALGYHTDNQMEK 21
+AE V R IE G+EP A TW LA GYH +NQMEK
Sbjct: 364 KAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEK 399
Score = 37.7 bits (86), Expect(3) = 3e-27
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 458 ELHRMEKLLMEMEADPLVTVYWNTYAVVAN 369
++ MEKLLM++E DP V WN Y V AN
Sbjct: 220 DMEGMEKLLMKLETDPAVNSDWNAYIVAAN 249
>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 78.2 bits (191), Expect(3) = 1e-26
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = -3
Query: 367 YIQAGDMEKALESLRKSEHLIRAKTR-LPYEVLLTLYARVGNKDEVYRIWXXXXXXXXXX 191
Y++A EKA+E L+KSE I ++R YE+LLTLYA +GNK E YRIW
Sbjct: 251 YLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYRIWNLYKTIGKFF 310
Query: 190 NASYLCMISSLAILDDLDGAEK 125
N Y+ M+SSL LDD+DGAEK
Sbjct: 311 NTGYVAMVSSLLKLDDMDGAEK 332
Score = 48.9 bits (115), Expect(3) = 1e-26
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2
Query: 128 EAESFVQRLIESGKEPNACTWSRLALGYHTDNQMEK 21
+AE V R IE G+EP A TW LA GYH +NQMEK
Sbjct: 364 KAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEK 399
Score = 37.7 bits (86), Expect(3) = 1e-26
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 458 ELHRMEKLLMEMEADPLVTVYWNTYAVVAN 369
++ MEKLLM++E DP V WN Y V AN
Sbjct: 220 DMEGMEKLLMKLETDPAVNSDWNAYIVAAN 249
>ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 78.2 bits (191), Expect(3) = 3e-26
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = -3
Query: 367 YIQAGDMEKALESLRKSEHLIRAKTR-LPYEVLLTLYARVGNKDEVYRIWXXXXXXXXXX 191
Y +AG E ++ L+K+E I K + L Y+ L+TLYA +GNKDEVYR+W
Sbjct: 253 YFKAGLSENSILMLKKAEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRF 312
Query: 190 NASYLCMISSLAILDDLDGAEKL 122
N+ YLC+ISSL LDD+DGAE++
Sbjct: 313 NSGYLCIISSLMKLDDIDGAERI 335
Score = 45.1 bits (105), Expect(3) = 3e-26
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 128 EAESFVQRLIESGKEPNACTWSRLALGYHTDNQMEK 21
+AE+++ RLIE+GKEP A TW LA GYH++ K
Sbjct: 366 KAEAYINRLIETGKEPEANTWDLLASGYHSNGLTNK 401
Score = 40.4 bits (93), Expect(3) = 3e-26
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2
Query: 458 ELHRMEKLLMEMEADPLVTVYWNTYAVVAN 369
++ MEKLL +MEADPLV W+TY VV N
Sbjct: 222 DITNMEKLLSKMEADPLVATDWHTYFVVGN 251
>ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 80.9 bits (198), Expect(3) = 3e-26
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = -3
Query: 367 YIQAGDMEKALESLRKSEHLIRAKTR-LPYEVLLTLYARVGNKDEVYRIWXXXXXXXXXX 191
Y +AG E ++ L+K+E LI K + L Y+ L+TLYA +GNKDEVYR+W
Sbjct: 253 YFKAGLSENSISMLKKAEQLIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF 312
Query: 190 NASYLCMISSLAILDDLDGAEKL 122
N+ YLC+ISSL LDD+DGAE++
Sbjct: 313 NSGYLCIISSLMKLDDIDGAERI 335
Score = 46.2 bits (108), Expect(3) = 3e-26
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 128 EAESFVQRLIESGKEPNACTWSRLALGYHTDNQMEK 21
+AE+++ RLIE+GKEP A W RLA GYH++ K
Sbjct: 366 KAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNK 401
Score = 36.6 bits (83), Expect(3) = 3e-26
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 458 ELHRMEKLLMEMEADPLVTVYWNTYAVVAN 369
++ MEKLL +MEADPLV W+ Y V N
Sbjct: 222 DITNMEKLLSKMEADPLVATDWHIYFTVGN 251
>ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 78.2 bits (191), Expect(3) = 3e-26
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = -3
Query: 367 YIQAGDMEKALESLRKSEHLIRAKTR-LPYEVLLTLYARVGNKDEVYRIWXXXXXXXXXX 191
Y +AG E ++ L+K+E I K + L Y+ L+TLYA +GNKDEVYR+W
Sbjct: 94 YFKAGLSENSILMLKKAEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRF 153
Query: 190 NASYLCMISSLAILDDLDGAEKL 122
N+ YLC+ISSL LDD+DGAE++
Sbjct: 154 NSGYLCIISSLMKLDDIDGAERI 176
Score = 45.1 bits (105), Expect(3) = 3e-26
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 128 EAESFVQRLIESGKEPNACTWSRLALGYHTDNQMEK 21
+AE+++ RLIE+GKEP A TW LA GYH++ K
Sbjct: 207 KAEAYINRLIETGKEPEANTWDLLASGYHSNGLTNK 242
Score = 40.4 bits (93), Expect(3) = 3e-26
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -2
Query: 458 ELHRMEKLLMEMEADPLVTVYWNTYAVVAN 369
++ MEKLL +MEADPLV W+TY VV N
Sbjct: 63 DITNMEKLLSKMEADPLVATDWHTYFVVGN 92