BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034151
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3...    59   5e-07
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   57   1e-06
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      57   1e-06
gb|ADB85414.1| putative retrotransposon protein [Phyllostachys e...    57   1e-06
gb|ADB85317.1| putative retrotransposon protein [Phyllostachys e...    57   1e-06

>gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|20270061|gb|AAM18149.1|AC092172_9
            Putative gag-pol precursor [Oryza sativa Japonica Group]
            gi|31430891|gb|AAP52743.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1964

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = +3

Query: 12   KLMPNWEGPYEVTEVPKPGTYRLKALDGSAIKNTWHAGRLRKYF 143
            KL P WEGP+ ++EV +PG+YRLK  DG+ + N+WH   LR+++
Sbjct: 1920 KLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWHIEHLRRFY 1963


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +3

Query: 3    NLGKLMPNWEGPYEVTEVPKPGTYRLKALDGSAIKNTWHAGRLRKYF 143
            N  KL P WEGPY V EV +PG+ RL   DG  + N+W+  +LRK++
Sbjct: 2050 NRNKLSPKWEGPYTVVEVTRPGSVRLAMSDGQILSNSWNIDQLRKFY 2096


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = +3

Query: 9    GKLMPNWEGPYEVTEVPKPGTYRLKALDGSAIKNTWHAGRLRKYF 143
            GK+  NWEGPY+V E  +PGTYRL  ++G  + + W+   LRKYF
Sbjct: 1262 GKMTTNWEGPYKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYF 1306


>gb|ADB85414.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1429

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +3

Query: 3    NLGKLMPNWEGPYEVTEVPKPGTYRLKALDGSAIKNTWHAGRLRKYF 143
            N  KL P WEGPY V EV +PG+ RL   DG  + N+W+  +LRK++
Sbjct: 1382 NRNKLSPKWEGPYTVVEVTRPGSVRLAMSDGQILSNSWNIDQLRKFY 1428


>gb|ADB85317.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 422

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   NLGKLMPNWEGPYEVTEVPKPGTYRLKALDGSAIKNTWHAGRLRKYF 143
           N  KL P WEGPY V EV +PG+ RL   DG  + N+W+  +LRK++
Sbjct: 375 NRNKLSPKWEGPYTVVEVTRPGSVRLAMEDGQVLSNSWNIDQLRKFY 421