BLASTX nr result

ID: Panax21_contig00034145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034145
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19342.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002510025.1| hydrolase, hydrolyzing O-glycosyl compounds,...   136   2e-30
gb|AAX33301.1| putative endo-1,4-beta-xylanase [Populus tremula ...   135   4e-30
ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...   134   6e-30
gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum]             134   8e-30

>emb|CBI19342.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/155 (50%), Positives = 101/155 (65%)
 Frame = -2

Query: 467 MEGVFKRSFIDRVLKANRKKKHSEEFKQSMENPSTSNIGNGFNSERSEEGLIEVRNSSRD 288
           M  ++   F  RV   ++K +  +    +MENP   N  +G + +++E  +      SRD
Sbjct: 1   MRRIWPCCFTRRVSNTHQKAEDIQRSIGTMENPKEGNADHGVSEKQNESTI-----KSRD 55

Query: 287 NVAANIILNHDFSGGLQSWHPNCCKAFLASANSDYPEGSLTKSGRNYAVISNRKECWQGL 108
           ++++NIILNHDFS GL SW+ NCC   + SA S + EG   KSG NYAVI+NRKECWQGL
Sbjct: 56  SLSSNIILNHDFSRGLHSWNLNCCNGSVVSAESGFLEGISVKSGGNYAVITNRKECWQGL 115

Query: 107 EQDITSRICPGSTYTVCASVGVSGPLQGFAYVLAT 3
           EQDITSR+  GSTY+V A VGVSG LQG A V AT
Sbjct: 116 EQDITSRVSLGSTYSVSACVGVSGSLQGSAVVQAT 150


>ref|XP_002510025.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis] gi|223550726|gb|EEF52212.1| hydrolase,
           hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis]
          Length = 644

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/100 (68%), Positives = 77/100 (77%)
 Frame = -2

Query: 302 NSSRDNVAANIILNHDFSGGLQSWHPNCCKAFLASANSDYPEGSLTKSGRNYAVISNRKE 123
           +SS DN A NII+NHDFS GL SWHPNCC  F+ SA S +P G L  SG  YA +SNRKE
Sbjct: 11  SSSSDN-AGNIIINHDFSEGLHSWHPNCCDGFVVSAESCHP-GFLPNSGGKYAAVSNRKE 68

Query: 122 CWQGLEQDITSRICPGSTYTVCASVGVSGPLQGFAYVLAT 3
           CWQGLEQDITSR+ PGS+Y+V A VGVSGP QG + VLAT
Sbjct: 69  CWQGLEQDITSRVSPGSSYSVSACVGVSGPFQGPSDVLAT 108


>gb|AAX33301.1| putative endo-1,4-beta-xylanase [Populus tremula x Populus
           tremuloides]
          Length = 915

 Score =  135 bits (339), Expect = 4e-30
 Identities = 73/120 (60%), Positives = 86/120 (71%)
 Frame = -2

Query: 362 SNIGNGFNSERSEEGLIEVRNSSRDNVAANIILNHDFSGGLQSWHPNCCKAFLASANSDY 183
           +N GN  +SE   + +I+  NS+    A NIILNHDFS GL SWHPNCC  F+ SA+S +
Sbjct: 6   NNNGND-HSETVSQNMIDSSNSN----APNIILNHDFSRGLNSWHPNCCDGFVLSADSGH 60

Query: 182 PEGSLTKSGRNYAVISNRKECWQGLEQDITSRICPGSTYTVCASVGVSGPLQGFAYVLAT 3
             G  TK G NYAV+SNRKECWQGLEQDITSRI P STY++ A VGVSGP+Q    VLAT
Sbjct: 61  -SGFSTKPGGNYAVVSNRKECWQGLEQDITSRISPCSTYSISARVGVSGPVQYPTDVLAT 119


>ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 981

 Score =  134 bits (338), Expect = 6e-30
 Identities = 80/188 (42%), Positives = 102/188 (54%), Gaps = 33/188 (17%)
 Frame = -2

Query: 467 MEGVFKRSFIDRVLKANRKKKHSEEFKQSMENPSTSNIGNGFN----------------- 339
           M  ++   F  RV   ++K +  +    +MENP   N  +G +                 
Sbjct: 1   MRRIWPCCFTRRVSNTHQKAEDIQRSIGTMENPKEGNADHGVSEFYFLFTFFWITGYCVH 60

Query: 338 ----------------SERSEEGLIEVRNSSRDNVAANIILNHDFSGGLQSWHPNCCKAF 207
                           S++  E  I+    SRD++++NIILNHDFS GL SW+ NCC   
Sbjct: 61  RSVRVPYFCAQQNKPLSKKQNESTIK----SRDSLSSNIILNHDFSRGLHSWNLNCCNGS 116

Query: 206 LASANSDYPEGSLTKSGRNYAVISNRKECWQGLEQDITSRICPGSTYTVCASVGVSGPLQ 27
           + SA S + EG   KSG NYAVI+NRKECWQGLEQDITSR+  GSTY+V A VGVSG LQ
Sbjct: 117 VVSAESGFLEGISVKSGGNYAVITNRKECWQGLEQDITSRVSLGSTYSVSACVGVSGSLQ 176

Query: 26  GFAYVLAT 3
           G A V AT
Sbjct: 177 GSAVVQAT 184


>gb|AAZ79233.1| putative xylanase Xyn2 [Nicotiana tabacum]
          Length = 918

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/128 (54%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
 Frame = -2

Query: 380 MENPSTSNIGNGFNSERSEEGLIEVRNSSRDN--VAANIILNHDFSGGLQSWHPNCCKAF 207
           ME        N F+S+ S+E      N  R     A NIILNH+FS GL SWHPNCC AF
Sbjct: 1   MEKSPIIAANNNFDSQTSKE------NGKRTGSYAATNIILNHEFSDGLNSWHPNCCDAF 54

Query: 206 LASANSDYPEGSLTKSGRNYAVISNRKECWQGLEQDITSRICPGSTYTVCASVGVSGPLQ 27
           +  A+S+Y +G  T+ G  YAV++NRKECWQGLEQDITS +  GSTYTV A VG SG  Q
Sbjct: 55  VVPASSEYHKGLTTEEGCCYAVVTNRKECWQGLEQDITSGVSAGSTYTVSACVGASGTFQ 114

Query: 26  GFAYVLAT 3
           G A V+AT
Sbjct: 115 GSAEVIAT 122


Top