BLASTX nr result

ID: Panax21_contig00034132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034132
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68636.1| hypothetical protein VITISV_030803 [Vitis vinifera]    98   9e-19
ref|XP_002264460.1| PREDICTED: probable cardiolipin synthase 1 [...    96   3e-18
ref|XP_004134756.1| PREDICTED: cardiolipin synthase-like [Cucumi...    90   2e-16
ref|XP_002305589.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002874816.1| predicted protein [Arabidopsis lyrata subsp....    86   3e-15

>emb|CAN68636.1| hypothetical protein VITISV_030803 [Vitis vinifera]
          Length = 2252

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 69/169 (40%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
 Frame = +2

Query: 53  NVSLMAIFRSLRALAQNPNSKRTFFNXXXXXXXXXXXXXXXXXXXXXXYHNHYXXXXXXX 232
           NV  MA+FRSL  L ++PNSKR                                      
Sbjct: 30  NVPPMAVFRSLNTLIRSPNSKRLLLTVSASATPFPRLSSILSPLSLSFASRFTYSHSRVL 89

Query: 233 XXXXXKWIIPFQGPLFLSSPPWKLSQSATPFYFQSDVVFLPKIQALSLLRSPNFPVNLGL 412
                   IPF+GPLFLSSPPWKLSQSATP   Q DVV L  ++AL LLR+ +FP+ LG 
Sbjct: 90  SPLSIS--IPFRGPLFLSSPPWKLSQSATPLLLQGDVV-LRNVEALKLLRNRSFPIRLGG 146

Query: 413 RSESGALPRLLNGTEVKELGGRD------GFVESLVNLPNLISMSRLIS 541
                A   LL   + K+L   D       FV S +NLPNLIS SRL S
Sbjct: 147 FGSVSAGTGLLGRLDKKQLISGDVGVAYGDFVXSFMNLPNLISFSRLAS 195


>ref|XP_002264460.1| PREDICTED: probable cardiolipin synthase 1 [Vitis vinifera]
           gi|302144088|emb|CBI23193.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 67/165 (40%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
 Frame = +2

Query: 65  MAIFRSLRALAQNPNSKRTFFNXXXXXXXXXXXXXXXXXXXXXXYHNHYXXXXXXXXXXX 244
           MA+FRSL  L ++PNSKR                                          
Sbjct: 1   MAVFRSLNTLIRSPNSKRLLLTVSASATPFPRLSSILSPLSLSFASRFTYSHSRVLSPLS 60

Query: 245 XKWIIPFQGPLFLSSPPWKLSQSATPFYFQSDVVFLPKIQALSLLRSPNFPVNLGLRSES 424
               IPF+GPLFLSSPPWKLSQSATP   Q DVV L  ++AL LLR+ +FP+ LG     
Sbjct: 61  IS--IPFRGPLFLSSPPWKLSQSATPLLLQGDVV-LRNVEALKLLRNRSFPIRLGGFGSV 117

Query: 425 GALPRLLNGTEVKELGGRD------GFVESLVNLPNLISMSRLIS 541
            A   LL   + K+L   D       FV+S +NLPNLIS SRL S
Sbjct: 118 SAGTGLLGRLDKKQLISGDVGVAYGDFVKSFMNLPNLISFSRLAS 162


>ref|XP_004134756.1| PREDICTED: cardiolipin synthase-like [Cucumis sativus]
           gi|449479437|ref|XP_004155599.1| PREDICTED: cardiolipin
           synthase-like [Cucumis sativus]
          Length = 343

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 61/163 (37%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
 Frame = +2

Query: 65  MAIFRSLRALAQNPNSKRTFFNXXXXXXXXXXXXXXXXXXXXXXYHNHYXXXXXXXXXXX 244
           MAIFRSL+ + +   S +TF                           ++           
Sbjct: 1   MAIFRSLKTIIKKNPSSKTFLTTTTCTISTPYSPLSYCPSQTLSPFGYHSTRLLSPLS-- 58

Query: 245 XKWIIPFQGPLFLSSPPWKLSQSATPFYFQSDVVFLPKIQA----LSLLRSPNFPVNLGL 412
            K I PF GPLFLSSPPWKLSQSATP Y Q + + L +++A    L+LLR    P+ +  
Sbjct: 59  -KLIFPFHGPLFLSSPPWKLSQSATPLYVQGNGIILRRVEAFNSRLNLLRRTKLPLRINF 117

Query: 413 RSESGALPRLLNGTEVKELGGRDGFVESLVNLPNLISMSRLIS 541
            S S   P LL+    +++   D +V   VNLPNLIS+SRLIS
Sbjct: 118 GSVSPP-PHLLDRLNSEKI--NDNWVHGFVNLPNLISLSRLIS 157


>ref|XP_002305589.1| predicted protein [Populus trichocarpa] gi|222848553|gb|EEE86100.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 62/169 (36%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
 Frame = +2

Query: 65  MAIFRSLRALAQ---NPNSKRTFFNXXXXXXXXXXXXXXXXXXXXXXYHNHYXXXXXXXX 235
           M I+RS++ L     N N  R+FF                       ++ +Y        
Sbjct: 1   MTIYRSIKTLISKIPNSNKSRSFFTTNSTIIQSPFAPF---------HYYYYYPPSSPPN 51

Query: 236 XXXXKWII---PFQGPLFLSSPPWKLSQSATPFYFQSDVVFLPKIQA--LSLLRSPNFPV 400
               KWI    PFQGPLFLSSPPWKL QS+ P Y + + + L K++A  L LL+S    V
Sbjct: 52  RFLSKWIFLNAPFQGPLFLSSPPWKLLQSSAPLYLRGNAIVLRKVEAFNLHLLKS---RV 108

Query: 401 NLGLRSESGALPR--LLNGTEVKELGGRDGFVESLVNLPNLISMSRLIS 541
             G   +     R  L+   EV + G +DG +ES VNLPN IS+SRL+S
Sbjct: 109 GSGYVGQGVLSDRVDLVKEEEVDDGGDKDGILESFVNLPNFISISRLVS 157


>ref|XP_002874816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320653|gb|EFH51075.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
 Frame = +2

Query: 248 KWIIPFQGPLFLSSPPWKLSQSATPFYFQSDVVFLPKIQALSL----LRS-PNFPVNLGL 412
           KW +P  GPLFLSSPPWKL QSATP +++ +   L K++AL+L    +RS   FP +LGL
Sbjct: 58  KWFVPLHGPLFLSSPPWKLLQSATPLHWRGNGAILKKVEALNLRLDRIRSRTRFPRHLGL 117

Query: 413 RSESGALPRLLNGTEVKELGGRDGFVESLVNLPNLISMSRLIS 541
           +S    + R     + KE  G  G ++S VN+PNLISM+RL+S
Sbjct: 118 QSVVPTVDR----NDSKEEDG--GILKSFVNVPNLISMARLVS 154


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