BLASTX nr result

ID: Panax21_contig00034115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034115
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]   112   7e-23
ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263...   112   1e-22
emb|CBI22944.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002516985.1| conserved hypothetical protein [Ricinus comm...   108   8e-22
ref|XP_002314351.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20

>emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]
          Length = 288

 Score =  112 bits (280), Expect = 7e-23
 Identities = 70/189 (37%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
 Frame = -1

Query: 518 SQTGQPVGPKDVEEVHVIYHHPPDYGYRXXXXXXXXXXXXXXXXXPNAPGIQ-------V 360
           +  G P  PKDVEEVHVIYHHPP+YGYR                  N  G+Q        
Sbjct: 138 ANAGNPARPKDVEEVHVIYHHPPEYGYR---YGYGHRYGGHWNNYSNVQGLQQEPPPTVY 194

Query: 359 SGGQG-------SSCANGTGIRHETPPPIYVAHSYNAYKPSPYVTEFVSLPSHYSHHSRP 201
           +  QG       +   N  G+ HE PPP+YV H YN YKP PY+TE+             
Sbjct: 195 TNVQGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPYITEY------------- 241

Query: 200 EPPQYVHYSRPEPPKYMHYNRQEPPQYSYSRPEPQQYTHYSRPEQYSEDYR---NGNGHI 30
              +Y+               + PP+++          HYSR ++YSEDYR   N NG+I
Sbjct: 242 ---EYI---------------RSPPRHA----------HYSRMDRYSEDYRNVNNSNGNI 273

Query: 29  ASMFSDENP 3
            SMFSDENP
Sbjct: 274 TSMFSDENP 282


>ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263762 [Vitis vinifera]
          Length = 292

 Score =  112 bits (279), Expect = 1e-22
 Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
 Frame = -1

Query: 509 GQPVGPKDVEEVHVIYHHPPDYGYRXXXXXXXXXXXXXXXXXPNAPGIQ-------VSGG 351
           G P  PKDVEEVHVIYHHPP+YGYR                  N  G+Q        +  
Sbjct: 145 GNPARPKDVEEVHVIYHHPPEYGYR---YGYGHRYGGHWNNYSNVQGLQQEPPPTVYTNV 201

Query: 350 QG-------SSCANGTGIRHETPPPIYVAHSYNAYKPSPYVTEFVSLPSHYSHHSRPEPP 192
           QG       +   N  G+ HE PPP+YV H YN YKP PY+TE+                
Sbjct: 202 QGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPYITEY---------------- 245

Query: 191 QYVHYSRPEPPKYMHYNRQEPPQYSYSRPEPQQYTHYSRPEQYSEDYR---NGNGHIASM 21
           +Y+               + PP+++          HYSR ++YSEDYR   N NG+I SM
Sbjct: 246 EYI---------------RSPPRHA----------HYSRMDRYSEDYRNVNNSNGNITSM 280

Query: 20  FSDENP 3
           FSDENP
Sbjct: 281 FSDENP 286


>emb|CBI22944.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  112 bits (279), Expect = 1e-22
 Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
 Frame = -1

Query: 509 GQPVGPKDVEEVHVIYHHPPDYGYRXXXXXXXXXXXXXXXXXPNAPGIQ-------VSGG 351
           G P  PKDVEEVHVIYHHPP+YGYR                  N  G+Q        +  
Sbjct: 129 GNPARPKDVEEVHVIYHHPPEYGYR---YGYGHRYGGHWNNYSNVQGLQQEPPPTVYTNV 185

Query: 350 QG-------SSCANGTGIRHETPPPIYVAHSYNAYKPSPYVTEFVSLPSHYSHHSRPEPP 192
           QG       +   N  G+ HE PPP+YV H YN YKP PY+TE+                
Sbjct: 186 QGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPYITEY---------------- 229

Query: 191 QYVHYSRPEPPKYMHYNRQEPPQYSYSRPEPQQYTHYSRPEQYSEDYR---NGNGHIASM 21
           +Y+               + PP+++          HYSR ++YSEDYR   N NG+I SM
Sbjct: 230 EYI---------------RSPPRHA----------HYSRMDRYSEDYRNVNNSNGNITSM 264

Query: 20  FSDENP 3
           FSDENP
Sbjct: 265 FSDENP 270


>ref|XP_002516985.1| conserved hypothetical protein [Ricinus communis]
           gi|223544073|gb|EEF45599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  108 bits (271), Expect = 8e-22
 Identities = 66/174 (37%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
 Frame = -1

Query: 518 SQTGQPVGPKDVEEVHVIYHHPPDYGYRXXXXXXXXXXXXXXXXXPNAPGIQVSGGQGSS 339
           +Q  Q  GPKDV EVHVIYHHPPDYGYR                         SGGQ + 
Sbjct: 155 NQPPQSSGPKDVGEVHVIYHHPPDYGYRYGYGHS-------------------SGGQWNR 195

Query: 338 CANGTGIRHETPPPIYVAHSYNAYKPSPYVTEFVSLPSHYSHHSRPEPPQYVHYSRPEPP 159
             NG G+  E P P+YV HSYN Y+PSPYVTE+                +Y+        
Sbjct: 196 YPNGHGLPPEPPQPVYVTHSYNTYRPSPYVTEY----------------EYIR------- 232

Query: 158 KYMHYNRQEPPQYSYSRPEPQQYTHYSRPEQYSEDYRNG--NGHIASMFSDENP 3
                              P ++T YSR + YS+DY     NG+I S+FSDENP
Sbjct: 233 ------------------SPPRHTTYSRMDHYSDDYHENSRNGNITSIFSDENP 268


>ref|XP_002314351.1| predicted protein [Populus trichocarpa] gi|222863391|gb|EEF00522.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  103 bits (258), Expect = 3e-20
 Identities = 64/172 (37%), Positives = 77/172 (44%)
 Frame = -1

Query: 518 SQTGQPVGPKDVEEVHVIYHHPPDYGYRXXXXXXXXXXXXXXXXXPNAPGIQVSGGQGSS 339
           +Q  +P GPKD  EVHVIYHHPPDYGYR                          GG  + 
Sbjct: 137 NQPQRPPGPKDSGEVHVIYHHPPDYGYRYAYGHNY-------------------GGNWNR 177

Query: 338 CANGTGIRHETPPPIYVAHSYNAYKPSPYVTEFVSLPSHYSHHSRPEPPQYVHYSRPEPP 159
                G+    P PIYV HSYN Y+PSP VTE+         + RP PP +  YSR +  
Sbjct: 178 HPISQGVPQAAPKPIYVTHSYNTYRPSPNVTEY--------EYLRPPPPHHTIYSRMD-- 227

Query: 158 KYMHYNRQEPPQYSYSRPEPQQYTHYSRPEQYSEDYRNGNGHIASMFSDENP 3
              HYN                       E Y ++ R+ NG+I SMFSDENP
Sbjct: 228 ---HYN-----------------------EDYHDNSRSNNGNITSMFSDENP 253


Top