BLASTX nr result

ID: Panax21_contig00034104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034104
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245...   173   1e-41
emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]   173   1e-41
emb|CBI18349.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_004169018.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   148   4e-34
ref|XP_004143896.1| PREDICTED: uncharacterized protein LOC101216...   148   4e-34

>ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245966 [Vitis vinifera]
          Length = 1009

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/112 (73%), Positives = 89/112 (79%)
 Frame = +3

Query: 156 HSTGPGNDHSWHREKHKNTGRRQVTSFVPNPTSFASNRLRSCDVYVGFHGRKPLLLRFTN 335
           HS G GN +S H EK K  GR    SF P   SF+SNRLRSCDV++G HGRKP LLRF N
Sbjct: 130 HSHGHGNGYSQHTEKQKKLGRSHGISFAPTSASFSSNRLRSCDVFIGLHGRKPPLLRFAN 189

Query: 336 WLRAELEVQGMSCFVTDRARCRNSRKHDIVEKTMDACTFGVIILTRKSFRNP 491
           WLRAELEVQGMSCFV+DRARCRNSRKH IVE+ MD  TFGV+ILTRKSFRNP
Sbjct: 190 WLRAELEVQGMSCFVSDRARCRNSRKHGIVERAMDVSTFGVVILTRKSFRNP 241


>emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]
          Length = 1011

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/112 (73%), Positives = 89/112 (79%)
 Frame = +3

Query: 156 HSTGPGNDHSWHREKHKNTGRRQVTSFVPNPTSFASNRLRSCDVYVGFHGRKPLLLRFTN 335
           HS G GN +S H EK K  GR    SF P   SF+SNRLRSCDV++G HGRKP LLRF N
Sbjct: 132 HSHGHGNGYSQHTEKQKKLGRSHGISFAPTSASFSSNRLRSCDVFIGLHGRKPPLLRFAN 191

Query: 336 WLRAELEVQGMSCFVTDRARCRNSRKHDIVEKTMDACTFGVIILTRKSFRNP 491
           WLRAELEVQGMSCFV+DRARCRNSRKH IVE+ MD  TFGV+ILTRKSFRNP
Sbjct: 192 WLRAELEVQGMSCFVSDRARCRNSRKHGIVERAMDVSTFGVVILTRKSFRNP 243


>emb|CBI18349.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/93 (77%), Positives = 78/93 (83%)
 Frame = +3

Query: 213 GRRQVTSFVPNPTSFASNRLRSCDVYVGFHGRKPLLLRFTNWLRAELEVQGMSCFVTDRA 392
           GR    SF P   SF+SNRLRSCDV++G HGRKP LLRF NWLRAELEVQGMSCFV+DRA
Sbjct: 159 GRSHGISFAPTSASFSSNRLRSCDVFIGLHGRKPPLLRFANWLRAELEVQGMSCFVSDRA 218

Query: 393 RCRNSRKHDIVEKTMDACTFGVIILTRKSFRNP 491
           RCRNSRKH IVE+ MD  TFGV+ILTRKSFRNP
Sbjct: 219 RCRNSRKHGIVERAMDVSTFGVVILTRKSFRNP 251


>ref|XP_004169018.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228162 [Cucumis sativus]
          Length = 999

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/131 (54%), Positives = 90/131 (68%)
 Frame = +3

Query: 99  QKFDXXXXXXXXXXXXXXXHSTGPGNDHSWHREKHKNTGRRQVTSFVPNPTSFASNRLRS 278
           QKFD                S   GN++   REK+K   R  +TS++  P S +S RLRS
Sbjct: 101 QKFDQASSSTGISGSTPYSCSIAHGNEYLGPREKYKKHSRSNLTSYMTAPISISSTRLRS 160

Query: 279 CDVYVGFHGRKPLLLRFTNWLRAELEVQGMSCFVTDRARCRNSRKHDIVEKTMDACTFGV 458
            DV++G HG KP LLRF NWLRAE+EV GMSCFV+DRA+CRNSRKH ++E+ MDA +FGV
Sbjct: 161 YDVFIGLHGSKPSLLRFANWLRAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGV 220

Query: 459 IILTRKSFRNP 491
           +ILT+KSF+NP
Sbjct: 221 VILTKKSFQNP 231


>ref|XP_004143896.1| PREDICTED: uncharacterized protein LOC101216244 [Cucumis sativus]
          Length = 999

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/131 (54%), Positives = 90/131 (68%)
 Frame = +3

Query: 99  QKFDXXXXXXXXXXXXXXXHSTGPGNDHSWHREKHKNTGRRQVTSFVPNPTSFASNRLRS 278
           QKFD                S   GN++   REK+K   R  +TS++  P S +S RLRS
Sbjct: 101 QKFDQASSSTGISGSTPYSCSIAHGNEYLGPREKYKKHSRSNLTSYMTAPISISSTRLRS 160

Query: 279 CDVYVGFHGRKPLLLRFTNWLRAELEVQGMSCFVTDRARCRNSRKHDIVEKTMDACTFGV 458
            DV++G HG KP LLRF NWLRAE+EV GMSCFV+DRA+CRNSRKH ++E+ MDA +FGV
Sbjct: 161 YDVFIGLHGSKPSLLRFANWLRAEMEVHGMSCFVSDRAKCRNSRKHRVIERAMDASSFGV 220

Query: 459 IILTRKSFRNP 491
           +ILT+KSF+NP
Sbjct: 221 VILTKKSFQNP 231


Top