BLASTX nr result

ID: Panax21_contig00034096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034096
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39533.3| unnamed protein product [Vitis vinifera]              100   1e-19
emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]   100   1e-19
ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis...    99   5e-19
ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002512467.1| conserved hypothetical protein [Ricinus comm...    85   7e-15

>emb|CBI39533.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/88 (53%), Positives = 62/88 (70%)
 Frame = -3

Query: 367 EMKLDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLM 188
           EM  +LLP DCI+++LSCT+P+D C+             SD++WEKFLPSDY+EI+SRL+
Sbjct: 482 EMNFELLPQDCISHILSCTSPRDACRSGLVSTTVRHAGDSDSVWEKFLPSDYQEILSRLV 541

Query: 187 FPVSFTSKKELFVKLSSPLLIDGGSKVY 104
            P+ F SKKEL+ KL  PLLID G K +
Sbjct: 542 SPLVFASKKELYSKLCRPLLIDEGRKSF 569



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = -3

Query: 358 LDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMFPV 179
           L+ LP+ C++ +LS T+P D C+             SD +WE+FLP+DY +I+SRL  P+
Sbjct: 267 LNTLPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDILSRLAEPL 326

Query: 178 SFTSKKELFVKLSSPLLIDGGSK 110
             +SKKELF++L  P LIDGG K
Sbjct: 327 VVSSKKELFLRLCDPSLIDGGKK 349



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/82 (43%), Positives = 55/82 (67%)
 Frame = -3

Query: 349 LPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMFPVSFT 170
           LP+ C++ +LS T+P D C+             SD +WE+FLP+DY +I+ RL+ P+  +
Sbjct: 9   LPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCRLVEPLVCS 68

Query: 169 SKKELFVKLSSPLLIDGGSKVY 104
           S+KELF++L  P+LIDGGSK +
Sbjct: 69  SRKELFLRLCDPILIDGGSKSF 90


>emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]
          Length = 277

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/87 (54%), Positives = 62/87 (71%)
 Frame = -3

Query: 364 MKLDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMF 185
           M  +LLP DCI+++LSCT+P+D C+             SD++WEKFLPSDY+EI+SRL+ 
Sbjct: 1   MNFELLPQDCISHILSCTSPRDACRSELVSTTVRHAGDSDSVWEKFLPSDYQEILSRLVS 60

Query: 184 PVSFTSKKELFVKLSSPLLIDGGSKVY 104
           P+ F SKKEL+ KL SPLLID G K +
Sbjct: 61  PLVFASKKELYSKLCSPLLIDEGRKSF 87


>ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis vinifera]
          Length = 277

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/87 (52%), Positives = 61/87 (70%)
 Frame = -3

Query: 364 MKLDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMF 185
           M  +LLP DCI+++LSCT+P+D C+             SD++WEKFLPSDY+EI+SRL+ 
Sbjct: 1   MNFELLPQDCISHILSCTSPRDACRSGLVSTTVRHAGDSDSVWEKFLPSDYQEILSRLVS 60

Query: 184 PVSFTSKKELFVKLSSPLLIDGGSKVY 104
           P+ F SKKEL+ KL  PLLID G K +
Sbjct: 61  PLVFASKKELYSKLCRPLLIDEGRKSF 87


>ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|222857349|gb|EEE94896.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = -3

Query: 361 KLDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMFP 182
           + ++LP+ C++ +LS T+PQD C+             SD +WE+FLP+DY++I+SR M P
Sbjct: 9   EFNILPEGCVSTILSFTSPQDACKSSLVSTIFQAAADSDVVWERFLPTDYQDIVSRSMVP 68

Query: 181 VSFTSKKELFVKLSSPLLIDGGSKVY 104
             F+SKKELF+ L + LLIDGG K +
Sbjct: 69  FKFSSKKELFLLLCNSLLIDGGKKSF 94


>ref|XP_002512467.1| conserved hypothetical protein [Ricinus communis]
           gi|223548428|gb|EEF49919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 288

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/84 (44%), Positives = 55/84 (65%)
 Frame = -3

Query: 358 LDLLPDDCIAYVLSCTTPQDVCQXXXXXXXXXXXXXSDNLWEKFLPSDYREIISRLMFPV 179
           +DLLP+DC A++LS  +P+D C               D +WEKFLPSDY EI+ RL+ P+
Sbjct: 1   MDLLPEDCFAHILSFISPKDACCTSIVSSAVRSSADLDTVWEKFLPSDYPEILFRLVSPI 60

Query: 178 SFTSKKELFVKLSSPLLIDGGSKV 107
           ++++KKELF +L +P  +D G K+
Sbjct: 61  NYSTKKELFTRLCNPHFLDEGRKI 84


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