BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034077
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II su...   257   8e-67
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   255   2e-66
ref|XP_003612256.1| DNA-directed RNA polymerase [Medicago trunca...   254   7e-66
emb|CAA36733.1| DNA-directed RNA polymerase [Glycine max]             253   9e-66
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   252   2e-65

>ref|XP_003537656.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Glycine
            max]
          Length = 1827

 Score =  257 bits (656), Expect = 8e-67
 Identities = 129/156 (82%), Positives = 141/156 (90%)
 Frame = +2

Query: 2    EKISFEFDDDLSCIFNDDNAEKLILRIRIMNYEGPKEGLLDESAEDDVLLKKIESNMLTE 181
            EKI+ EFDDDL+CIFNDDNAEKLILRIRIMN E PK  + DESAEDDV LKKIESNMLTE
Sbjct: 1231 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTE 1290

Query: 182  MSLQGIPGIMKVFIKNLKMSKFNDDEGFKPKEEWMLDTESVNLLAVLCCEDVDATRTTSN 361
            M+L+GIP I KVFIKN K+ KF++++GFKP EEWMLDTE VNLLAV+C EDVDATRTTSN
Sbjct: 1291 MTLRGIPDINKVFIKNTKVQKFDENQGFKPNEEWMLDTEGVNLLAVMCHEDVDATRTTSN 1350

Query: 362  HLIEVIEVLGIEAVRRSLLDELRTVISFDGSYVNYR 469
            HLIEVIEVLGIEAVRR+LLDELR VISFDGSYVNYR
Sbjct: 1351 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYR 1386


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Glycine
            max]
          Length = 1827

 Score =  255 bits (652), Expect = 2e-66
 Identities = 128/156 (82%), Positives = 140/156 (89%)
 Frame = +2

Query: 2    EKISFEFDDDLSCIFNDDNAEKLILRIRIMNYEGPKEGLLDESAEDDVLLKKIESNMLTE 181
            EKI+ EFDDDL+CIFNDDNAEKLILRIRIMN E PK  + DESAEDDV LKKIESNMLTE
Sbjct: 1231 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTE 1290

Query: 182  MSLQGIPGIMKVFIKNLKMSKFNDDEGFKPKEEWMLDTESVNLLAVLCCEDVDATRTTSN 361
            M+L+GIP I KVFIKN K+ KF++++GFKP EEWMLDTE VNLLAV+C EDVD TRTTSN
Sbjct: 1291 MTLRGIPDINKVFIKNTKVQKFDENQGFKPNEEWMLDTEGVNLLAVMCHEDVDVTRTTSN 1350

Query: 362  HLIEVIEVLGIEAVRRSLLDELRTVISFDGSYVNYR 469
            HLIEVIEVLGIEAVRR+LLDELR VISFDGSYVNYR
Sbjct: 1351 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYR 1386


>ref|XP_003612256.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355513591|gb|AES95214.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1864

 Score =  254 bits (648), Expect = 7e-66
 Identities = 129/156 (82%), Positives = 139/156 (89%)
 Frame = +2

Query: 2    EKISFEFDDDLSCIFNDDNAEKLILRIRIMNYEGPKEGLLDESAEDDVLLKKIESNMLTE 181
            EKI+ EFD DL+CIFNDDNAEKLILRIRIMN E PK  + DESAEDDV LKKIESNMLTE
Sbjct: 1249 EKINHEFDGDLTCIFNDDNAEKLILRIRIMNDEAPKGDIQDESAEDDVFLKKIESNMLTE 1308

Query: 182  MSLQGIPGIMKVFIKNLKMSKFNDDEGFKPKEEWMLDTESVNLLAVLCCEDVDATRTTSN 361
            M+L+GIP I KVFIKN K+ KF+++EGFKP EEWMLDTE VNLLAV+C EDVDA RTTSN
Sbjct: 1309 MTLRGIPDINKVFIKNTKIQKFDENEGFKPHEEWMLDTEGVNLLAVMCHEDVDAKRTTSN 1368

Query: 362  HLIEVIEVLGIEAVRRSLLDELRTVISFDGSYVNYR 469
            HLIEVIEVLGIEAVRRSLLDELR VISFDGSYVNYR
Sbjct: 1369 HLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYR 1404


>emb|CAA36733.1| DNA-directed RNA polymerase [Glycine max]
          Length = 625

 Score =  253 bits (647), Expect = 9e-66
 Identities = 128/156 (82%), Positives = 139/156 (89%)
 Frame = +2

Query: 2   EKISFEFDDDLSCIFNDDNAEKLILRIRIMNYEGPKEGLLDESAEDDVLLKKIESNMLTE 181
           EKI+ EFDDDL+CIFNDDNAEKLILRIRIMN E PK  + DESAEDDV LKKIESNMLTE
Sbjct: 58  EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTE 117

Query: 182 MSLQGIPGIMKVFIKNLKMSKFNDDEGFKPKEEWMLDTESVNLLAVLCCEDVDATRTTSN 361
           M+L+GIP I KVFIKN K+ KF+ ++GFKP EEWMLDTE VNLLAV+C EDVD TRTTSN
Sbjct: 118 MTLRGIPDINKVFIKNTKVQKFDVNQGFKPNEEWMLDTEGVNLLAVMCHEDVDVTRTTSN 177

Query: 362 HLIEVIEVLGIEAVRRSLLDELRTVISFDGSYVNYR 469
           HLIEVIEVLGIEAVRR+LLDELR VISFDGSYVNYR
Sbjct: 178 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYR 213


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  252 bits (644), Expect = 2e-65
 Identities = 129/156 (82%), Positives = 140/156 (89%)
 Frame = +2

Query: 2    EKISFEFDDDLSCIFNDDNAEKLILRIRIMNYEGPKEGLLDESAEDDVLLKKIESNMLTE 181
            EKI+ EFDDDL+CIFNDDNAEKLILRIRIMN E PK  L DESAEDDV LKKIESNMLTE
Sbjct: 1231 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTE 1290

Query: 182  MSLQGIPGIMKVFIKNLKMSKFNDDEGFKPKEEWMLDTESVNLLAVLCCEDVDATRTTSN 361
            M+L+GIP I KVFIK+ K++KF++ EGFKP+ EWMLDTE VNLLAV+C EDVDA RTTSN
Sbjct: 1291 MALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSN 1350

Query: 362  HLIEVIEVLGIEAVRRSLLDELRTVISFDGSYVNYR 469
            HLIEVIEVLGIEAVRRSLLDELR VISFDGSYVNYR
Sbjct: 1351 HLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYR 1386