BLASTX nr result

ID: Panax21_contig00034066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034066
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia]                    162   3e-38
gb|AGG37288.1| alpha-tubulin 6 [Salix arbutifolia]                    162   3e-38
gb|AGG37286.1| alpha-tubulin 4 [Salix arbutifolia]                    162   3e-38
gb|AGG37284.1| alpha-tubulin 2 [Salix arbutifolia]                    162   3e-38
ref|XP_002325422.1| tubulin alpha-8 chain [Populus trichocarpa] ...   162   3e-38

>gb|AGG37290.1| alpha-tubulin 8 [Salix arbutifolia]
          Length = 449

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 2   CGINYEAPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRINHKFDLMYSKRAFVHWYVGEG 181
           CGINY+ PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRI+HKFDLMYSKRAFVHWYVGEG
Sbjct: 353 CGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412

Query: 182 MEEGEFSEAREDLAALEKDY 241
           MEEGEFSEAREDLAALEKDY
Sbjct: 413 MEEGEFSEAREDLAALEKDY 432


>gb|AGG37288.1| alpha-tubulin 6 [Salix arbutifolia]
          Length = 449

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 2   CGINYEAPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRINHKFDLMYSKRAFVHWYVGEG 181
           CGINY+ PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRI+HKFDLMYSKRAFVHWYVGEG
Sbjct: 353 CGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412

Query: 182 MEEGEFSEAREDLAALEKDY 241
           MEEGEFSEAREDLAALEKDY
Sbjct: 413 MEEGEFSEAREDLAALEKDY 432


>gb|AGG37286.1| alpha-tubulin 4 [Salix arbutifolia]
          Length = 450

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 2   CGINYEAPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRINHKFDLMYSKRAFVHWYVGEG 181
           CGINY+ PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRI+HKFDLMYSKRAFVHWYVGEG
Sbjct: 353 CGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412

Query: 182 MEEGEFSEAREDLAALEKDY 241
           MEEGEFSEAREDLAALEKDY
Sbjct: 413 MEEGEFSEAREDLAALEKDY 432


>gb|AGG37284.1| alpha-tubulin 2 [Salix arbutifolia]
          Length = 450

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 2   CGINYEAPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRINHKFDLMYSKRAFVHWYVGEG 181
           CGINY+ PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRI+HKFDLMYSKRAFVHWYVGEG
Sbjct: 353 CGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412

Query: 182 MEEGEFSEAREDLAALEKDY 241
           MEEGEFSEAREDLAALEKDY
Sbjct: 413 MEEGEFSEAREDLAALEKDY 432


>ref|XP_002325422.1| tubulin alpha-8 chain [Populus trichocarpa]
           gi|222862297|gb|EEE99803.1| tubulin alpha-8 chain
           [Populus trichocarpa]
          Length = 449

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 2   CGINYEAPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRINHKFDLMYSKRAFVHWYVGEG 181
           CGINY+ PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRI+HKFDLMYSKRAFVHWYVGEG
Sbjct: 353 CGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412

Query: 182 MEEGEFSEAREDLAALEKDY 241
           MEEGEFSEAREDLAALEKDY
Sbjct: 413 MEEGEFSEAREDLAALEKDY 432


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