BLASTX nr result

ID: Panax21_contig00034064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034064
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   432   e-119
emb|CBI24149.3| unnamed protein product [Vitis vinifera]              428   e-118
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   403   e-110
dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]    394   e-107

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
            [Vitis vinifera]
          Length = 507

 Score =  432 bits (1111), Expect = e-119
 Identities = 209/269 (77%), Positives = 240/269 (89%)
 Frame = +2

Query: 2    SAAWVEKYKPQIEGFISRLDAINTISWRPSTEILKEEGLDLSDLAEVDPSTSLESVKVLE 181
            SAAWVEKYKPQ+E  ISR+D IN I+WR S E+LKEEGLDL+DL  +   TS + VKV+E
Sbjct: 239  SAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTSHQRVKVIE 298

Query: 182  NGISYLVSPEGQKTGFYADQRESRQFIHSISEGQRVLDMCCYTGGFALNAASGNATSVTG 361
            NGISY +SPEGQKTGFYADQRE+R FI +ISEGQRVLDMCCY+GGFALNA  G A +VTG
Sbjct: 299  NGISYAISPEGQKTGFYADQRENRHFISTISEGQRVLDMCCYSGGFALNAVCGGAVNVTG 358

Query: 362  VDTSLPALELANQNVVLNHLDTKRISFIRKDGTAFMKDAVSKNKSWDIVIMDPPKLAPRK 541
            VDTS+PALELAN+N++LN+LD  +ISF+R+D T FMKDAV++N+SWDIVI+DPPKLAPR+
Sbjct: 359  VDTSMPALELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRR 418

Query: 542  KVLHSAIGMYRNLNSLAMRLTKRGGLLMTCSCSGAMTQSGKFLNVLQGAASMAGRKITVL 721
            KVL SA GMYRNLNSLAM+LT+RGGLLMTCSCSGAMTQSG F+ +LQGAASMAGRKIT+L
Sbjct: 419  KVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQGAASMAGRKITLL 478

Query: 722  RQAGAACDHPIDPSYPEGAYLSNILLRVL 808
            RQAGAACDHPIDPSYPEGAYLSNIL RVL
Sbjct: 479  RQAGAACDHPIDPSYPEGAYLSNILFRVL 507


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  428 bits (1101), Expect = e-118
 Identities = 207/269 (76%), Positives = 238/269 (88%)
 Frame = +2

Query: 2   SAAWVEKYKPQIEGFISRLDAINTISWRPSTEILKEEGLDLSDLAEVDPSTSLESVKVLE 181
           SAAWVEKYKPQ+E  ISR+D IN I+WR S E+LKEEGLDL+DL  +   TS + VKV+E
Sbjct: 119 SAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTSHQRVKVIE 178

Query: 182 NGISYLVSPEGQKTGFYADQRESRQFIHSISEGQRVLDMCCYTGGFALNAASGNATSVTG 361
           NGISY +SPEGQKTGFYADQRE+R FI +ISEGQRVLDMCCY+GGFALNA  G A +VTG
Sbjct: 179 NGISYAISPEGQKTGFYADQRENRHFISTISEGQRVLDMCCYSGGFALNAVCGGAVNVTG 238

Query: 362 VDTSLPALELANQNVVLNHLDTKRISFIRKDGTAFMKDAVSKNKSWDIVIMDPPKLAPRK 541
           VDTS+PALELAN+N++LN+LD  +ISF+R+D T FMKDAV++N+SWDIVI+DPPKLAPR+
Sbjct: 239 VDTSMPALELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRR 298

Query: 542 KVLHSAIGMYRNLNSLAMRLTKRGGLLMTCSCSGAMTQSGKFLNVLQGAASMAGRKITVL 721
           KVL SA GMYRNLNSLAM+LT+RGGLLMTCSCSGAMTQSG F+ +LQ  ASMAGRKIT+L
Sbjct: 299 KVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQATASMAGRKITLL 358

Query: 722 RQAGAACDHPIDPSYPEGAYLSNILLRVL 808
           RQAGAACDHPIDPSYPEGAYLSNIL RVL
Sbjct: 359 RQAGAACDHPIDPSYPEGAYLSNILFRVL 387


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  420 bits (1080), Expect = e-115
 Identities = 204/269 (75%), Positives = 237/269 (88%)
 Frame = +2

Query: 2   SAAWVEKYKPQIEGFISRLDAINTISWRPSTEILKEEGLDLSDLAEVDPSTSLESVKVLE 181
           SAAWVE YKP++E  I+R+D IN I+WRPS +ILKEEG+D+SD+ EV PST  E +KV+E
Sbjct: 119 SAAWVENYKPEVEACINRIDGINHINWRPSVDILKEEGMDVSDMKEVHPSTCPERIKVME 178

Query: 182 NGISYLVSPEGQKTGFYADQRESRQFIHSISEGQRVLDMCCYTGGFALNAASGNATSVTG 361
           NGISY +S  GQKTGFYADQRE+RQFI +IS GQ+VLD+CCY+GGFALNAA G A  VTG
Sbjct: 179 NGISYAISLVGQKTGFYADQRENRQFISTISNGQKVLDICCYSGGFALNAAHGGAIDVTG 238

Query: 362 VDTSLPALELANQNVVLNHLDTKRISFIRKDGTAFMKDAVSKNKSWDIVIMDPPKLAPRK 541
           VDTS+PALELA +N+VLN+LD  RISF+R+D   FMK A+S+N+SWDIVI+DPPKLAPRK
Sbjct: 239 VDTSMPALELARENIVLNNLDPGRISFLREDAIQFMKGALSRNESWDIVILDPPKLAPRK 298

Query: 542 KVLHSAIGMYRNLNSLAMRLTKRGGLLMTCSCSGAMTQSGKFLNVLQGAASMAGRKITVL 721
           KVL +A GMYRN+NS+A+RLTKRGGLLMTCSCSGAMTQSG FL VLQGAASMAGRKI+VL
Sbjct: 299 KVLQNASGMYRNMNSMALRLTKRGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKISVL 358

Query: 722 RQAGAACDHPIDPSYPEGAYLSNILLRVL 808
           R+AGAA DHPIDPSYPEGAYLSNILLRVL
Sbjct: 359 REAGAASDHPIDPSYPEGAYLSNILLRVL 387


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  403 bits (1035), Expect = e-110
 Identities = 193/269 (71%), Positives = 231/269 (85%)
 Frame = +2

Query: 2   SAAWVEKYKPQIEGFISRLDAINTISWRPSTEILKEEGLDLSDLAEVDPSTSLESVKVLE 181
           SAAWVEKYK +IE  +  ++ IN + WRPS +ILKEEG+D+S+L +  PST  E  KV+E
Sbjct: 171 SAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVME 230

Query: 182 NGISYLVSPEGQKTGFYADQRESRQFIHSISEGQRVLDMCCYTGGFALNAASGNATSVTG 361
           N I Y +S EGQKTGFYADQRE+R FI +ISEGQ+VLD+CCY+GGF+LNA  G A +VTG
Sbjct: 231 NDIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

Query: 362 VDTSLPALELANQNVVLNHLDTKRISFIRKDGTAFMKDAVSKNKSWDIVIMDPPKLAPRK 541
           +D+SLPALELA +NVVLN +D +RISF++ D TAFMKDA+S+N+SWD+VI+DPPKLAPRK
Sbjct: 291 IDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRK 350

Query: 542 KVLHSAIGMYRNLNSLAMRLTKRGGLLMTCSCSGAMTQSGKFLNVLQGAASMAGRKITVL 721
           KVL +A GMYRNLNSLAM+LT++GG LMTCSCSGAMTQSG FL +LQGAAS A +KITVL
Sbjct: 351 KVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVL 410

Query: 722 RQAGAACDHPIDPSYPEGAYLSNILLRVL 808
           RQAGAACDHPIDP+YPEGAYLSNILLRVL
Sbjct: 411 RQAGAACDHPIDPTYPEGAYLSNILLRVL 439


>dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score =  394 bits (1013), Expect = e-107
 Identities = 189/269 (70%), Positives = 232/269 (86%)
 Frame = +2

Query: 2   SAAWVEKYKPQIEGFISRLDAINTISWRPSTEILKEEGLDLSDLAEVDPSTSLESVKVLE 181
           SAAWVEKY+ QI+  +S++  +N I WR S++ILKEEGLD+S+  E  PS+   +VKV+E
Sbjct: 186 SAAWVEKYRQQIQSLVSKVSDVNHIKWRSSSDILKEEGLDMSEQTEPAPSSYSGTVKVME 245

Query: 182 NGISYLVSPEGQKTGFYADQRESRQFIHSISEGQRVLDMCCYTGGFALNAASGNATSVTG 361
           NGI YLVS EGQKTGFYADQRE+R FI ++S+GQRVLD+CCY+GGFAL+AA G AT+VTG
Sbjct: 246 NGIVYLVSMEGQKTGFYADQRENRHFISTLSKGQRVLDLCCYSGGFALSAAKGGATNVTG 305

Query: 362 VDTSLPALELANQNVVLNHLDTKRISFIRKDGTAFMKDAVSKNKSWDIVIMDPPKLAPRK 541
           +D+S  AL+LAN+N++LN LD +RISF+++D TAFMK A+S+N+ WD+VI+DPPKLAPRK
Sbjct: 306 IDSSGSALDLANENILLNKLDAERISFLKEDATAFMKGAISRNELWDLVILDPPKLAPRK 365

Query: 542 KVLHSAIGMYRNLNSLAMRLTKRGGLLMTCSCSGAMTQSGKFLNVLQGAASMAGRKITVL 721
           KVL SA GMYR+LN+LAM++ K GGLLMTCSCSGAMTQSG FL  +QGAASMAGRK+TVL
Sbjct: 366 KVLQSASGMYRSLNALAMQVVKPGGLLMTCSCSGAMTQSGLFLKTIQGAASMAGRKVTVL 425

Query: 722 RQAGAACDHPIDPSYPEGAYLSNILLRVL 808
           RQAGAACDHPIDPSYPEG YLSN LLRV+
Sbjct: 426 RQAGAACDHPIDPSYPEGQYLSNYLLRVM 454


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