BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034039
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64116.1| hypothetical protein VITISV_041858 [Vitis vinifera]   140   2e-31
emb|CAN63189.1| hypothetical protein VITISV_005008 [Vitis vinifera]   103   1e-25
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   118   1e-24
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   118   1e-24
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   116   4e-24

>emb|CAN64116.1| hypothetical protein VITISV_041858 [Vitis vinifera]
          Length = 1471

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/105 (63%), Positives = 80/105 (76%)
 Frame = +1

Query: 25   TIPRTPQQNSVAERRNRTLLDVVRSMMAQTNLPISYRGDALLTATYILNRVHSKSVQSTP 204
            TIPRT   N VA+RRNR LL +VRSM+ Q+N PISY GDALLT +++LN+V SK V STP
Sbjct: 1309 TIPRTXXHNVVAKRRNRILLHMVRSMVVQSNPPISYWGDALLTTSHVLNQVPSKFVSSTP 1368

Query: 205  YEMWTGRKPELGDMRPWGSAAYVHNTSHKYEKLGMRSKKCIFIRF 339
            YE+W  RKP  G++RPW S AYVHN  HKYEKLG   +KCI IR+
Sbjct: 1369 YELWNXRKPNPGNLRPWRSVAYVHNPLHKYEKLGHXGRKCIXIRY 1413


>emb|CAN63189.1| hypothetical protein VITISV_005008 [Vitis vinifera]
          Length = 320

 Score =  103 bits (258), Expect(2) = 1e-25
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +1

Query: 133 RGDALLTATYILNRVHSKSVQSTPYEMWTGRKPELGDMRPWGSAAYVHNTSHKYEKLGMR 312
           +GDALLTATY+LN+V  K++ STPYE+W  RK +L ++RPWGSAAY+H  SHKY KLG R
Sbjct: 108 QGDALLTATYVLNQVPLKTIASTPYELWNNRKCDLSNLRPWGSAAYIHILSHKYGKLGPR 167

Query: 313 SKKCIFIRF 339
            +KCIFIR+
Sbjct: 168 GRKCIFIRY 176



 Score = 38.5 bits (88), Expect(2) = 1e-25
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +2

Query: 338 SKHSKGYVFV*EQSDVTVSKIESRDTDFL 424
           S+HSKGYVF+ E  D  V+++ESRD  FL
Sbjct: 177 SEHSKGYVFIGEHEDGIVTELESRDATFL 205


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  118 bits (296), Expect = 1e-24
 Identities = 60/108 (55%), Positives = 76/108 (70%)
 Frame = +1

Query: 10  IIRQLTIPRTPQQNSVAERRNRTLLDVVRSMMAQTNLPISYRGDALLTATYILNRVHSKS 189
           I+ QLT P TPQ N+V+ERRNRTLLD+VRSMM+QTNLP+S+ G AL T  + LN V SKS
Sbjct: 636 IVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNLPLSFSGYALETTAFTLNWVPSKS 695

Query: 190 VQSTPYEMWTGRKPELGDMRPWGSAAYVHNTSHKYEKLGMRSKKCIFI 333
           V  TPYE+WTG +P L  ++ WG   YV     + +KL  +S KC F+
Sbjct: 696 VDKTPYEIWTGNRPSLSFLKIWGYEVYVKRL--QSDKLTPKSDKCFFV 741


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  118 bits (295), Expect = 1e-24
 Identities = 60/110 (54%), Positives = 78/110 (70%)
 Frame = +1

Query: 10   IIRQLTIPRTPQQNSVAERRNRTLLDVVRSMMAQTNLPISYRGDALLTATYILNRVHSKS 189
            I+ QLT P TPQ N V+ERRNRTLL++VRSMM+QTNL +S+ G AL TA + LNRV SKS
Sbjct: 1060 IVPQLTPPGTPQWNGVSERRNRTLLNMVRSMMSQTNLLLSFWGYALETAAFTLNRVPSKS 1119

Query: 190  VQSTPYEMWTGRKPELGDMRPWGSAAYVHNTSHKYEKLGMRSKKCIFIRF 339
            V  TPYE+WTG++P L  ++ WG   YV     + +KL  +S KC F+ +
Sbjct: 1120 VDKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDKLTPKSNKCFFVGY 1167


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  116 bits (291), Expect = 4e-24
 Identities = 58/110 (52%), Positives = 77/110 (70%)
 Frame = +1

Query: 10  IIRQLTIPRTPQQNSVAERRNRTLLDVVRSMMAQTNLPISYRGDALLTATYILNRVHSKS 189
           I+ QLT P TPQ N V+ERRNRTLLD+VRSMM+QT+LP+S+   AL  A + LN+V SKS
Sbjct: 380 IVPQLTPPGTPQWNGVSERRNRTLLDIVRSMMSQTDLPLSFWAYALEKAAFTLNKVPSKS 439

Query: 190 VQSTPYEMWTGRKPELGDMRPWGSAAYVHNTSHKYEKLGMRSKKCIFIRF 339
           V  TPYE+WTG++P L  ++ WG   YV     + +KL  +S KC F+ +
Sbjct: 440 VNKTPYEIWTGKRPSLSFLKIWGCEVYVKRL--QSDKLTPKSDKCFFVGY 487