BLASTX nr result

ID: Panax21_contig00034015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034015
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305060.1| cellulose synthase [Populus trichocarpa] gi|...    69   4e-10
ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...    66   3e-09
emb|CBI30712.3| unnamed protein product [Vitis vinifera]               66   3e-09
gb|AFZ78566.1| cellulose synthase [Populus tomentosa]                  63   3e-08
gb|AEE60894.1| cellulose synthase [Populus tomentosa]                  63   3e-08

>ref|XP_002305060.1| cellulose synthase [Populus trichocarpa]
           gi|222848024|gb|EEE85571.1| cellulose synthase [Populus
           trichocarpa]
          Length = 1014

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/86 (44%), Positives = 56/86 (65%)
 Frame = -2

Query: 258 YDEEKRFTSQNLPPFSDGLAMKQHLKSWAYAVACNVREISTLADVETKESGSRSTMAAHL 79
           YDE + F   ++P     L +      ++YA  C +   + L DVE K SG++STMA+HL
Sbjct: 58  YDEFETFIVVHIPENPFHLLVTHLFIYYSYANLCLLSPENLLDDVEKKGSGNQSTMASHL 117

Query: 78  STVQEVGLHARNISTVSTVDSDVIDE 1
           +  Q+VG+HAR+IS+VSTVDS++ DE
Sbjct: 118 NDSQDVGIHARHISSVSTVDSEMNDE 143


>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -2

Query: 147 EISTLADVETKESGSRSTMAAHLSTVQEVGLHARNISTVSTVDSDVIDE 1
           E ST+ADVET +S + STMAAHL+  Q+VG+H R++STVSTVDS++ D+
Sbjct: 437 ESSTMADVETNQSSNHSTMAAHLNDAQDVGMHTRHVSTVSTVDSELNDD 485


>emb|CBI30712.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -2

Query: 147 EISTLADVETKESGSRSTMAAHLSTVQEVGLHARNISTVSTVDSDVIDE 1
           E ST+ADVET +S + STMAAHL+  Q+VG+H R++STVSTVDS++ D+
Sbjct: 60  ESSTMADVETNQSSNHSTMAAHLNDAQDVGMHTRHVSTVSTVDSELNDD 108


>gb|AFZ78566.1| cellulose synthase [Populus tomentosa]
          Length = 978

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = -2

Query: 135 LADVETKESGSRSTMAAHLSTVQEVGLHARNISTVSTVDSDVIDE 1
           L DVE KESG++STMA+HL+  Q+VG+HAR+IS+VSTVDS++ DE
Sbjct: 63  LDDVEKKESGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDE 107


>gb|AEE60894.1| cellulose synthase [Populus tomentosa]
          Length = 978

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = -2

Query: 135 LADVETKESGSRSTMAAHLSTVQEVGLHARNISTVSTVDSDVIDE 1
           L DVE KESG++STMA+HL+  Q+VG+HAR+IS+VSTVDS++ DE
Sbjct: 63  LDDVEKKESGNQSTMASHLNDSQDVGIHARHISSVSTVDSEMNDE 107


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