BLASTX nr result

ID: Panax21_contig00034005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034005
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518111.1| conserved hypothetical protein [Ricinus comm...   119   5e-25
emb|CBI37313.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   113   2e-23
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-23
gb|ABK94910.1| unknown [Populus trichocarpa]                          112   5e-23

>ref|XP_002518111.1| conserved hypothetical protein [Ricinus communis]
           gi|223542707|gb|EEF44244.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score =  119 bits (297), Expect = 5e-25
 Identities = 78/217 (35%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
 Frame = +1

Query: 1   RRERQVIEEEKEFGVFSPQFDNYL--SESNSSKEFSTLGGTSPHSVTTS---------HT 147
           RRE+QV EEEK+ G FSPQFD+++  S SN   +       SP  V             T
Sbjct: 40  RREKQVGEEEKQMGHFSPQFDHHVFGSHSNQDVDVPNKSVLSPTDVMAQDYSDDCFSRQT 99

Query: 148 KNPSSKKSSEVND--KNLITTTPATXXXXXXXXXXXHEKSV------FENRLVNGCCSQV 303
           K+ S   S E      + I  TP+T             +         E+R +  C   V
Sbjct: 100 KSSSLPNSLEATKHINDTIDATPSTLYRSSEGSGSTATEKCSLTGEELEDRTLKQC--SV 157

Query: 304 LMTDLLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCECPVCQSTHPNGFPKVCLVXX 483
            ++DL CA CK LL+RP+VLNCGHVYCE CI  P  +   C +CQS HPNGFP +CL+  
Sbjct: 158 SVSDLQCAECKNLLFRPLVLNCGHVYCETCICTPMAETPRCGICQSLHPNGFPGICLLLE 217

Query: 484 XXXXXXXXXXYVARKLYVLEHADRQYGSPSTCSTQAQ 594
                     Y  R+  +L+  D         STQ Q
Sbjct: 218 QFLEKHFPKIYAKRREGLLKQTDCLAAKRQEGSTQVQ 254


>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  113 bits (283), Expect = 2e-23
 Identities = 69/209 (33%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
 Frame = +1

Query: 1   RRERQVIEEEKEFGVFSPQFDNYLSESNSSKEFSTLGGTSPHSVTTSHTKNPSSKKSSEV 180
           RRE+Q +E E+E   FSP+FD Y   S++ K+       +  S+T    K      S+ V
Sbjct: 72  RREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPSITVFEFKLCPDSSSNRV 131

Query: 181 N---------------DKNLITTTPATXXXXXXXXXXXHEKSVFENRLVNGCCSQVLMTD 315
                              +I  +  T            E++V     ++  C Q+ + D
Sbjct: 132 KKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNLDQTCEQLSIAD 191

Query: 316 LLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCECPVCQSTHPNGFPKVCLVXXXXXX 495
           + C  CKQLL+RPVVLNCGHVYCE C   P ++   C VCQ  HP+GFPKVCL       
Sbjct: 192 VQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKVCQVLHPSGFPKVCLELDNFLE 251

Query: 496 XXXXXXYVARKLYVLEHADRQYGSPSTCS 582
                 Y  R+  V   A   + +PST S
Sbjct: 252 EQFPEEYALRREAVQLKAVHLHDAPSTWS 280


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  113 bits (283), Expect = 2e-23
 Identities = 69/209 (33%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
 Frame = +1

Query: 1   RRERQVIEEEKEFGVFSPQFDNYLSESNSSKEFSTLGGTSPHSVTTSHTKNPSSKKSSEV 180
           RRE+Q +E E+E   FSP+FD Y   S++ K+       +  S+T    K      S+ V
Sbjct: 91  RREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPSITVFEFKLCPDSSSNRV 150

Query: 181 N---------------DKNLITTTPATXXXXXXXXXXXHEKSVFENRLVNGCCSQVLMTD 315
                              +I  +  T            E++V     ++  C Q+ + D
Sbjct: 151 KKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNLDQTCEQLSIAD 210

Query: 316 LLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCECPVCQSTHPNGFPKVCLVXXXXXX 495
           + C  CKQLL+RPVVLNCGHVYCE C   P ++   C VCQ  HP+GFPKVCL       
Sbjct: 211 VQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKVCQVLHPSGFPKVCLELDNFLE 270

Query: 496 XXXXXXYVARKLYVLEHADRQYGSPSTCS 582
                 Y  R+  V   A   + +PST S
Sbjct: 271 EQFPEEYALRREAVQLKAVHLHDAPSTWS 299



 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
 Frame = +1

Query: 268 ENRLVNGCCSQVLMTDLLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCE--CPVCQS 441
           E++ ++G  S  +     C VC  LLY+P+VL CGH+ C  C+ Y  +   E  CP+C++
Sbjct: 6   EDQFLDGADSDEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRN 65

Query: 442 THPNGFPKVCLVXXXXXXXXXXXXYVARKLYVLEHAD 552
            + + FP +C +            Y  R+   LE  +
Sbjct: 66  PYSH-FPTICQMLHFMLLKMYPVAYKRREKQTLEREE 101


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  112 bits (280), Expect = 5e-23
 Identities = 69/199 (34%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
 Frame = +1

Query: 1   RRERQVIEEEKEFGVFSPQFDNYLSESNSSKEFSTLGGTSPHSVTTSHTKNPSSKKSSEV 180
           RRER+V EEEK+ G FSPQF ++   S+S +E       S H       K     K+   
Sbjct: 120 RREREVGEEEKKGGRFSPQFVHHPFGSHSGEELD-FPSYSQHFPIHPQNKLCYFPKAIAH 178

Query: 181 NDKNL-ITTTPATXXXXXXXXXXXHEKSVFENRLVNGCCSQVLMTDLLCAVCKQLLYRPV 357
            ++N+ I  +  +              ++      +G  +Q  + DLLCA CK+LL++PV
Sbjct: 179 REENMKIVPSTLSSRSDGTTNAAIENCNLIGTEFGHGIKTQASVADLLCAECKKLLFQPV 238

Query: 358 VLNCGHVYCEACIIYPNNKLCECPVCQSTHPNGFPKVCLVXXXXXXXXXXXXYVARKLYV 537
           VLNCGHVYCE+CI  P   +  C +CQS HPNG P VCLV            Y  R+   
Sbjct: 239 VLNCGHVYCESCIASPMQGIPRCQICQSLHPNGIPSVCLVLEHFLEEQFSEIYAERR--- 295

Query: 538 LEHADRQYGSPSTCSTQAQ 594
                  +   + CS+ AQ
Sbjct: 296 -----EAFAKQTDCSSSAQ 309



 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
 Frame = +1

Query: 307 MTDLLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCE--CPVCQSTHPNGFPKVC 471
           + +  C+VC  LLY+PVVL CGH+ C  C+ Y  N L E  CP+C+    N FP VC
Sbjct: 48  LDEFQCSVCLDLLYKPVVLGCGHLSCFWCVFYSMNGLRESHCPICRHQF-NHFPSVC 103


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  112 bits (280), Expect = 5e-23
 Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
 Frame = +1

Query: 1   RRERQVIEEEKEFGVFSPQFDNYLSESNSSKEFSTLGGTSPHSVTTSHTKNP----SSKK 168
           RRE Q +EEE E G FSPQF     E NS  +         H++ +   +N     S+++
Sbjct: 106 RREEQTLEEEMEMGFFSPQFG--YKECNSDLKHHHPRDRK-HALDSCFFRNGEFCGSTQQ 162

Query: 169 SSEVNDKNLITTTPATXXXXXXXXXXXHEK--SVFENRLV----NGCCSQVLMTDLLCAV 330
              V   ++I     +             K  SV EN L     N  C QV + D+ C+ 
Sbjct: 163 IESVKSVSMIQAPTMSIPNKVCDENCCMIKPDSVEENNLPEDKSNRNCKQVSIADVQCST 222

Query: 331 CKQLLYRPVVLNCGHVYCEACIIYPNNKLCECPVCQSTHPNGFPKVCLVXXXXXXXXXXX 510
           CKQLL+ PVVLNCGHVYCE C I P N++  C VCQS HP GFPKVCL            
Sbjct: 223 CKQLLFHPVVLNCGHVYCETC-IGPVNEMLTCQVCQSLHPRGFPKVCLEFDHFLEEYFPT 281

Query: 511 XYVAR-KLYVLEHADRQYGSPSTCSTQAQQ 597
            Y  R +    +    ++  P TCST+A +
Sbjct: 282 EYAMRIEAVQAKQVPVKFQHPITCSTKASE 311



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = +1

Query: 277 LVNGCCSQVLMTDLLCAVCKQLLYRPVVLNCGHVYCEACIIYPNNKLCE--CPVCQSTHP 450
           LV+    +       C+VC  LLY+P+VL+CGH+ C  C+    + L E  CP+C+  HP
Sbjct: 24  LVDADLEEEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICR--HP 81

Query: 451 -NGFPKVCLVXXXXXXXXXXXXYVARKLYVLE 543
            N FP +C +            Y  R+   LE
Sbjct: 82  YNHFPTICQMLHFLLFKLYPMVYTRREEQTLE 113


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