BLASTX nr result

ID: Panax21_contig00034004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034004
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]   246   1e-63
ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetas...   245   3e-63
emb|CBI17224.3| unnamed protein product [Vitis vinifera]              239   2e-61
ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetas...   239   2e-61
ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|2...   234   9e-60

>emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]
          Length = 652

 Score =  246 bits (629), Expect = 1e-63
 Identities = 118/157 (75%), Positives = 137/157 (87%)
 Frame = +1

Query: 1   KPQGLGYGSVIPDAPGAETHFLTKSLAEKIGKYVEQYLEDMEKIKLKQGLKIEMSISSEG 180
           K  GLGYGS IPDAPGAE+H+LTK+LAEK+G Y+EQY+E MEK+KLKQGLKI MSISSEG
Sbjct: 421 KAPGLGYGSSIPDAPGAESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEG 480

Query: 181 NAYLQNTKFWKLYKEDEASCSIVIKTSVGLVYLIACLLEPFMPLFTIKVLKQLNLPPENI 360
           N YLQ ++FWKLYKED ASCSIV++TSVGLVYL++CLLEPFMP F+++VLKQLNLPPE  
Sbjct: 481 NGYLQESQFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETR 540

Query: 361 LSLCDENGDLGRAIKPCDLLPVVHIIGTPAPLFKELI 471
           LSLCDENGDL RA KP +LLP  H +GTP PLF EL+
Sbjct: 541 LSLCDENGDLERARKPWELLPAGHKMGTPEPLFNELV 577


>ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
           gi|296081059|emb|CBI18340.3| unnamed protein product
           [Vitis vinifera]
          Length = 804

 Score =  245 bits (626), Expect = 3e-63
 Identities = 118/156 (75%), Positives = 136/156 (87%)
 Frame = +1

Query: 1   KPQGLGYGSVIPDAPGAETHFLTKSLAEKIGKYVEQYLEDMEKIKLKQGLKIEMSISSEG 180
           K  GLGYGS IPDAPGAE+H+LTK+LAEK+G Y+EQY+E MEK+KLKQGLKI MSISSEG
Sbjct: 420 KAPGLGYGSSIPDAPGAESHYLTKALAEKVGAYLEQYIEAMEKVKLKQGLKIGMSISSEG 479

Query: 181 NAYLQNTKFWKLYKEDEASCSIVIKTSVGLVYLIACLLEPFMPLFTIKVLKQLNLPPENI 360
           N YLQ ++FWKLYKED ASCSIV++TSVGLVYL++CLLEPFMP F+++VLKQLNLPPE  
Sbjct: 480 NGYLQESQFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETR 539

Query: 361 LSLCDENGDLGRAIKPCDLLPVVHIIGTPAPLFKEL 468
           LSLCDENGDL RA KP +LLP  H +GTP PLF EL
Sbjct: 540 LSLCDENGDLERARKPWELLPAGHKMGTPEPLFNEL 575


>emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  239 bits (611), Expect = 2e-61
 Identities = 113/156 (72%), Positives = 135/156 (86%)
 Frame = +1

Query: 1   KPQGLGYGSVIPDAPGAETHFLTKSLAEKIGKYVEQYLEDMEKIKLKQGLKIEMSISSEG 180
           KP GLGYGSVIPDAPGAE H LTK+LAEK+G++VEQY+E MEK+KLKQGLK  MSISSEG
Sbjct: 424 KPAGLGYGSVIPDAPGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEG 483

Query: 181 NAYLQNTKFWKLYKEDEASCSIVIKTSVGLVYLIACLLEPFMPLFTIKVLKQLNLPPENI 360
           NAYLQ ++FWKLYKED+ SCSIV+KTS+GLV+L+ACLLEPFMP F+++VLKQLN+PPE  
Sbjct: 484 NAYLQESQFWKLYKEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPETS 543

Query: 361 LSLCDENGDLGRAIKPCDLLPVVHIIGTPAPLFKEL 468
             LCDE GD+ RA +P +++P  H IGTP PLFKEL
Sbjct: 544 FLLCDEKGDIERAKRPWEIVPAGHRIGTPEPLFKEL 579


>ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
          Length = 807

 Score =  239 bits (611), Expect = 2e-61
 Identities = 113/156 (72%), Positives = 135/156 (86%)
 Frame = +1

Query: 1   KPQGLGYGSVIPDAPGAETHFLTKSLAEKIGKYVEQYLEDMEKIKLKQGLKIEMSISSEG 180
           KP GLGYGSVIPDAPGAE H LTK+LAEK+G++VEQY+E MEK+KLKQGLK  MSISSEG
Sbjct: 424 KPAGLGYGSVIPDAPGAELHQLTKTLAEKVGRFVEQYVEAMEKVKLKQGLKTAMSISSEG 483

Query: 181 NAYLQNTKFWKLYKEDEASCSIVIKTSVGLVYLIACLLEPFMPLFTIKVLKQLNLPPENI 360
           NAYLQ ++FWKLYKED+ SCSIV+KTS+GLV+L+ACLLEPFMP F+++VLKQLN+PPE  
Sbjct: 484 NAYLQESQFWKLYKEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPETS 543

Query: 361 LSLCDENGDLGRAIKPCDLLPVVHIIGTPAPLFKEL 468
             LCDE GD+ RA +P +++P  H IGTP PLFKEL
Sbjct: 544 FLLCDEKGDIERAKRPWEIVPAGHRIGTPEPLFKEL 579


>ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  234 bits (596), Expect = 9e-60
 Identities = 114/156 (73%), Positives = 133/156 (85%)
 Frame = +1

Query: 1   KPQGLGYGSVIPDAPGAETHFLTKSLAEKIGKYVEQYLEDMEKIKLKQGLKIEMSISSEG 180
           KP GLGYGS+IPDAPGA++H LTK LA ++GKYVEQYLE MEK+KLKQGLK  MSISSEG
Sbjct: 418 KPPGLGYGSIIPDAPGADSHPLTKKLAGEVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 477

Query: 181 NAYLQNTKFWKLYKEDEASCSIVIKTSVGLVYLIACLLEPFMPLFTIKVLKQLNLPPENI 360
           NAYLQ ++FWKLYKED+ SCSIVIKTS+GLVYL+ACLLEPF+P F+++V KQLNLP E  
Sbjct: 478 NAYLQESQFWKLYKEDQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQLNLPLEQ- 536

Query: 361 LSLCDENGDLGRAIKPCDLLPVVHIIGTPAPLFKEL 468
            SLCDE GD+ RA +P ++LP  H IGTP PLFKEL
Sbjct: 537 ASLCDEKGDMDRAKRPWEILPAGHKIGTPEPLFKEL 572


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