BLASTX nr result
ID: Panax21_contig00033946
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033946 (493 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256... 194 6e-48 ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2... 189 2e-46 ref|NP_565080.1| Mitochondrial transcription termination factor ... 186 1e-45 ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arab... 181 4e-44 gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [A... 165 3e-39 >ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera] gi|297734077|emb|CBI15324.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 194 bits (493), Expect = 6e-48 Identities = 97/161 (60%), Positives = 124/161 (77%) Frame = +1 Query: 10 CVQRVKGLGFSDITVCRVLEVSPEAILFTSGEIIRDKINFLEGIGIQRNGIDWIFGKFPG 189 CV+ +KGLGFSD TV R+LE P I+ EI R KI FL GIGI +GID IF PG Sbjct: 157 CVKVLKGLGFSDGTVDRILEEFPRVIMSNESEIQR-KIQFLLGIGIPESGIDGIFHSLPG 215 Query: 190 VLAFGLENRLKPLLDEFMDLSCSLVEVKKEIVRDPKVLGLEVGELSQCLRMLRSLKCRIS 369 +L G+E+RL+PLLDEF L S V++EI R+P++LG+E+GE+S+CL ++ +LKCR+ Sbjct: 216 ILGLGIEDRLEPLLDEFGKLGFSEDVVRREISREPRMLGMELGEMSRCLELVGTLKCRVP 275 Query: 370 VKEKIFCDGAFRAGYEVKLRVDCLCKYGLIRRDAFTVLWKE 492 +KEKIF +GA RAG+EVKLRVDCLC+YGLIRR+AF VLWKE Sbjct: 276 IKEKIFREGALRAGFEVKLRVDCLCRYGLIRREAFEVLWKE 316 >ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1| predicted protein [Populus trichocarpa] Length = 412 Score = 189 bits (481), Expect = 2e-46 Identities = 97/157 (61%), Positives = 119/157 (75%) Frame = +1 Query: 22 VKGLGFSDITVCRVLEVSPEAILFTSGEIIRDKINFLEGIGIQRNGIDWIFGKFPGVLAF 201 +KGLGFS+ T RVLE P I EI R +I FL IGI R+G+D +F FP VL F Sbjct: 121 LKGLGFSESTTRRVLEGFPGVIALKECEIHR-RIQFLMAIGIPRDGVDRVFNSFPEVLGF 179 Query: 202 GLENRLKPLLDEFMDLSCSLVEVKKEIVRDPKVLGLEVGELSQCLRMLRSLKCRISVKEK 381 G+ENRL PLL+EF DL S V+KEI+R+P++LG+EVGELS+CL ++RSLKCR +K K Sbjct: 180 GIENRLMPLLNEFKDLGFSEELVRKEIIREPRILGMEVGELSRCLDLIRSLKCREPIKLK 239 Query: 382 IFCDGAFRAGYEVKLRVDCLCKYGLIRRDAFTVLWKE 492 IF GAFRAG+EVKLRVDCLCK+ LIRR+AF +LWKE Sbjct: 240 IFSKGAFRAGFEVKLRVDCLCKHRLIRREAFKILWKE 276 >ref|NP_565080.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein; 33994-35331 [Arabidopsis thaliana] gi|332197431|gb|AEE35552.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 445 Score = 186 bits (473), Expect = 1e-45 Identities = 96/161 (59%), Positives = 116/161 (72%) Frame = +1 Query: 10 CVQRVKGLGFSDITVCRVLEVSPEAILFTSGEIIRDKINFLEGIGIQRNGIDWIFGKFPG 189 CV+ +K LGF D TV R+L P +L EI R KI FL GIGI R+ I+ F FP Sbjct: 150 CVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEI-RRKIEFLVGIGIARDNIERFFHVFPE 208 Query: 190 VLAFGLENRLKPLLDEFMDLSCSLVEVKKEIVRDPKVLGLEVGELSQCLRMLRSLKCRIS 369 VL G E RLKPLLDEFM + S +VKKEI R+P+VLGLE+GEL +CL ++ +LKCR Sbjct: 209 VLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREV 268 Query: 370 VKEKIFCDGAFRAGYEVKLRVDCLCKYGLIRRDAFTVLWKE 492 ++ I +GAFRAG+EVKLRVDCLCKYGLIRRDAF V+WKE Sbjct: 269 IRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKE 309 >ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata] gi|297334807|gb|EFH65225.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp. lyrata] Length = 449 Score = 181 bits (460), Expect = 4e-44 Identities = 92/161 (57%), Positives = 116/161 (72%) Frame = +1 Query: 10 CVQRVKGLGFSDITVCRVLEVSPEAILFTSGEIIRDKINFLEGIGIQRNGIDWIFGKFPG 189 C++ +KGLGF D TV R+L P +L EI R KI FL GI I R+ I+ F FP Sbjct: 154 CIRVLKGLGFCDSTVSRILSSFPGVLLVNEIEIHR-KIEFLVGIDIPRDNIERFFHVFPE 212 Query: 190 VLAFGLENRLKPLLDEFMDLSCSLVEVKKEIVRDPKVLGLEVGELSQCLRMLRSLKCRIS 369 VL G E RLKPLLDEF+ + S ++K+EI R+P+VLGLE+GEL +CL ++ +LKCR Sbjct: 213 VLGIGTETRLKPLLDEFIKMGFSKDDIKEEIAREPRVLGLELGELPRCLELINTLKCREV 272 Query: 370 VKEKIFCDGAFRAGYEVKLRVDCLCKYGLIRRDAFTVLWKE 492 ++ I +GAFRAG+EVKLRVDCLCKYGLIRRDAF V+WKE Sbjct: 273 IRLSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKE 313 >gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana] Length = 404 Score = 165 bits (418), Expect = 3e-39 Identities = 90/161 (55%), Positives = 109/161 (67%) Frame = +1 Query: 10 CVQRVKGLGFSDITVCRVLEVSPEAILFTSGEIIRDKINFLEGIGIQRNGIDWIFGKFPG 189 CV+ +K LGF D TV R+L P +L EI R KI FL GIGI R+ I+ F FP Sbjct: 111 CVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEI-RRKIEFLVGIGIARDNIERFFHVFPE 169 Query: 190 VLAFGLENRLKPLLDEFMDLSCSLVEVKKEIVRDPKVLGLEVGELSQCLRMLRSLKCRIS 369 VL G E RLKPLLDEFM + S +VKKEI R+ + L EL +CL ++ +LKCR Sbjct: 170 VLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREREFLVWS--ELPRCLELINTLKCREV 227 Query: 370 VKEKIFCDGAFRAGYEVKLRVDCLCKYGLIRRDAFTVLWKE 492 ++ I +GAFRAG+EVKLRVDCLCKYGLIRRDAF V+WKE Sbjct: 228 IRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKE 268