BLASTX nr result

ID: Panax21_contig00033936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033936
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245...    72   4e-11
ref|XP_002327084.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arab...    56   3e-06

>ref|XP_002283812.1| PREDICTED: uncharacterized protein LOC100245429 [Vitis vinifera]
           gi|302142414|emb|CBI19617.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = +3

Query: 237 LVPGLKTRVKDYSLPSLSRGFVVCASGDNQEGKSNFSGQK-----NAGVDGVEPFRGKAG 401
           L+PGLK   K+ SL S  RG  +C+   N + K  +SG++       G DGVEPFRGK+G
Sbjct: 50  LMPGLK---KECSLSSFGRGATLCSLNSNSDAKLKYSGREITSVSGNGFDGVEPFRGKSG 106

Query: 402 SISFFGVTHQLVEEGRL 452
           S+SF G+THQ VEE +L
Sbjct: 107 SVSFHGLTHQRVEESKL 123


>ref|XP_002327084.1| predicted protein [Populus trichocarpa] gi|222835399|gb|EEE73834.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
 Frame = +3

Query: 243 PGLKTRVKDYSLPSLSRGFVVC---ASGDNQEGKSNFSGQKNAGV-----DGVEPFRGKA 398
           PG K   K  S  SL+RG V+C   +S  N +     S +K++GV     +GVEPF GK+
Sbjct: 52  PGFKNIFKGISWSSLNRGVVICGSSSSNSNADADLKISRRKSSGVPASSSNGVEPFNGKS 111

Query: 399 GSISFFGVTHQLVEEGRL 452
           GS+SF G+THQ VEEGRL
Sbjct: 112 GSVSFHGLTHQSVEEGRL 129


>ref|XP_002891435.1| hypothetical protein ARALYDRAFT_473986 [Arabidopsis lyrata subsp.
           lyrata] gi|297337277|gb|EFH67694.1| hypothetical protein
           ARALYDRAFT_473986 [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +3

Query: 270 YSLPSLSRGFVVCASGDNQEGKSNFSGQKNAGVDGVEPFRGKAGSISFFGVTHQLVEEGR 449
           ++ P LSRG V C+S   Q GKSN++          E FRGK+GS+SF G+THQLVEE +
Sbjct: 49  WNKPQLSRGHVACSS--KQSGKSNYAR--------AELFRGKSGSVSFNGLTHQLVEESK 98

Query: 450 L 452
           L
Sbjct: 99  L 99


Top