BLASTX nr result

ID: Panax21_contig00033935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033935
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277237.1| PREDICTED: histone deacetylase 8 [Vitis vini...   617   e-174
emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]   614   e-173
ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   609   e-172
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   608   e-171
ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi...   597   e-168

>ref|XP_002277237.1| PREDICTED: histone deacetylase 8 [Vitis vinifera]
          Length = 379

 Score =  617 bits (1592), Expect = e-174
 Identities = 289/369 (78%), Positives = 324/369 (87%), Gaps = 1/369 (0%)
 Frame = +2

Query: 176  IHVFWHEGMLNHETGTGVFDTGFDPGFLDILEKHPENSDRIKNMVSILKRGPISPFISWH 355
            I+VFWHEGML H+TG GVFDTG DPGFLD+LEKHPENS+R++NMVSILKRGPISP+ISWH
Sbjct: 10   INVFWHEGMLKHDTGIGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYISWH 69

Query: 356  SGRPALISELQTFHTQDYINELTGADRIGGKVICSGTILNPGSWHXXXXXXXXXXXXMKH 535
            SG PALIS L +FHT +YINEL  ADR GGK +CSGT LNPGSW             MKH
Sbjct: 70   SGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAMKH 129

Query: 536  ILDGSGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVVVVDIDVHYGN 715
            ILDG GK+AYALVRPPGHHAQP+QADGYCFLNNAGLAVQLAL+SGC KV V+DIDVHYGN
Sbjct: 130  ILDGHGKIAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALNSGCAKVAVIDIDVHYGN 189

Query: 716  GTAEGFYGSNKVLTVSLHMNHGSWGPSHPQSGAVDKVGKGEGFGYNMNIPLPNGTGDRGY 895
            GTAEGFY S+KVLT+SLHMNHGSWGPSHPQSG+VD++G GEGFGYN+NIPLPNGTGDRGY
Sbjct: 190  GTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDRGY 249

Query: 896  KYAMTELIVPAVQKFEPDMMVLVVGQDSCAFDPNGRQCLTMEGYREIGQIIRSLADKHSD 1075
             YAM +L+VPA+QK+EP+MMVLVVGQDS AFDPNGRQCLTMEGYREIGQI+R LADK+SD
Sbjct: 250  AYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSD 309

Query: 1076 GCLLIVQEGGYHVTYSSYCLHATLEGVLNLPHPLLSDPIAYYPEDESFSVQVINSIKQYQ 1255
            G LLIVQEGGY VTYS+YCLHATLEGVLNLP PLLSDPIAYYPEDE  + +VI++IK++Q
Sbjct: 310  GHLLIVQEGGYQVTYSAYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQ 369

Query: 1256 KD-VPLLEG 1279
                P L+G
Sbjct: 370  NSTAPFLKG 378


>emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]
          Length = 379

 Score =  614 bits (1583), Expect = e-173
 Identities = 288/369 (78%), Positives = 322/369 (87%), Gaps = 1/369 (0%)
 Frame = +2

Query: 176  IHVFWHEGMLNHETGTGVFDTGFDPGFLDILEKHPENSDRIKNMVSILKRGPISPFISWH 355
            I+VFWHEGML H+TG GVFDTG DPGFLD+LEKHPENS+R++NMVSILKRGPISP+ISWH
Sbjct: 10   INVFWHEGMLKHDTGNGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYISWH 69

Query: 356  SGRPALISELQTFHTQDYINELTGADRIGGKVICSGTILNPGSWHXXXXXXXXXXXXMKH 535
            SG PALIS L +FHT +YINEL  ADR GGK +CSGT LNPGSW             MKH
Sbjct: 70   SGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAMKH 129

Query: 536  ILDGSGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVVVVDIDVHYGN 715
            ILDG GK+AYALVRPPGHHAQP QADGYCFLNNAGLAVQLAL+SGC KV V DIDVHYGN
Sbjct: 130  ILDGHGKIAYALVRPPGHHAQPGQADGYCFLNNAGLAVQLALNSGCAKVAVXDIDVHYGN 189

Query: 716  GTAEGFYGSNKVLTVSLHMNHGSWGPSHPQSGAVDKVGKGEGFGYNMNIPLPNGTGDRGY 895
            GTAEGFY S+KVLT+SLHMNHGSWGPSHPQSG+VD++G GEGFGYN+NIPLPNGTGDRGY
Sbjct: 190  GTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDRGY 249

Query: 896  KYAMTELIVPAVQKFEPDMMVLVVGQDSCAFDPNGRQCLTMEGYREIGQIIRSLADKHSD 1075
             YAM +L+VPA+QK+EP+MMVLVVGQDS AFDPNGRQCLTMEGYREIGQI+R LADK+SD
Sbjct: 250  AYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSD 309

Query: 1076 GCLLIVQEGGYHVTYSSYCLHATLEGVLNLPHPLLSDPIAYYPEDESFSVQVINSIKQYQ 1255
            G LLIVQEGGY +TYS+YCLHATLEGVLNLP PLLSDPIAYYPEDE  + +VI++IK++Q
Sbjct: 310  GRLLIVQEGGYQLTYSAYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQ 369

Query: 1256 KD-VPLLEG 1279
                P L+G
Sbjct: 370  NSTAPFLKG 378


>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi|87240922|gb|ABD32780.1|
            Histone deacetylase superfamily [Medicago truncatula]
            gi|355485930|gb|AES67133.1| Histone deacetylase [Medicago
            truncatula]
          Length = 386

 Score =  609 bits (1571), Expect = e-172
 Identities = 281/364 (77%), Positives = 317/364 (87%)
 Frame = +2

Query: 170  DRIHVFWHEGMLNHETGTGVFDTGFDPGFLDILEKHPENSDRIKNMVSILKRGPISPFIS 349
            ++I VFWHEGML H+TG GVFDTG DPGFLDILEKHPENSDR+KNMVSILKRGPISP++S
Sbjct: 15   NKIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVS 74

Query: 350  WHSGRPALISELQTFHTQDYINELTGADRIGGKVICSGTILNPGSWHXXXXXXXXXXXXM 529
            WH GR ALI EL +FHT +YINEL  AD+ G KV+C+GT LNPGSW             M
Sbjct: 75   WHLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDAALLAAGTTLSSM 134

Query: 530  KHILDGSGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVVVVDIDVHY 709
            KH+LDG GK+AYALVRPPGHHAQP+QADGYCFLNNAGLAVQLALDSGCKKV V+DIDVHY
Sbjct: 135  KHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHY 194

Query: 710  GNGTAEGFYGSNKVLTVSLHMNHGSWGPSHPQSGAVDKVGKGEGFGYNMNIPLPNGTGDR 889
            GNGTAEGFY SNKVLTVSLHMNHGSWGPSHPQSG++D++G GEG+GYN+NIPLPNGTGD 
Sbjct: 195  GNGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDN 254

Query: 890  GYKYAMTELIVPAVQKFEPDMMVLVVGQDSCAFDPNGRQCLTMEGYREIGQIIRSLADKH 1069
            GY YA  EL+VP++ KFEPDM+VLVVGQDS AFDPNGRQCLTMEGYREIG+I+  LA +H
Sbjct: 255  GYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRH 314

Query: 1070 SDGCLLIVQEGGYHVTYSSYCLHATLEGVLNLPHPLLSDPIAYYPEDESFSVQVINSIKQ 1249
            SDG LLIVQEGGYHVTYS+YCLHATLEGVLNLP PLL DP+AYYPED++FSV+VI +++ 
Sbjct: 315  SDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQN 374

Query: 1250 YQKD 1261
            Y  D
Sbjct: 375  YVTD 378


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
            [Medicago truncatula]
          Length = 386

 Score =  608 bits (1567), Expect = e-171
 Identities = 280/364 (76%), Positives = 317/364 (87%)
 Frame = +2

Query: 170  DRIHVFWHEGMLNHETGTGVFDTGFDPGFLDILEKHPENSDRIKNMVSILKRGPISPFIS 349
            ++I VFWHEGML H+TG GVFDTG DPGFLDILEKHPENSDR+KNMVSILKRGPISP++S
Sbjct: 15   NKIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVS 74

Query: 350  WHSGRPALISELQTFHTQDYINELTGADRIGGKVICSGTILNPGSWHXXXXXXXXXXXXM 529
            WH GR ALI EL +FHT +YINEL  AD+ G KV+C+GT LNPGSW             M
Sbjct: 75   WHLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDAALLAAGTTLSSM 134

Query: 530  KHILDGSGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVVVVDIDVHY 709
            KH+LDG GK+AYALVRPPGHHAQP+QADGYCFLNNAGLAVQLALDSGCKKV V+DIDVHY
Sbjct: 135  KHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHY 194

Query: 710  GNGTAEGFYGSNKVLTVSLHMNHGSWGPSHPQSGAVDKVGKGEGFGYNMNIPLPNGTGDR 889
            GNGTAEGFY SN+VLTVSLHMNHGSWGPSHPQSG++D++G GEG+GYN+NIPLPNGTGD 
Sbjct: 195  GNGTAEGFYSSNEVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDN 254

Query: 890  GYKYAMTELIVPAVQKFEPDMMVLVVGQDSCAFDPNGRQCLTMEGYREIGQIIRSLADKH 1069
            GY YA  EL+VP++ KFEPDM+VLVVGQDS AFDPNGRQCLTMEGYREIG+I+  LA +H
Sbjct: 255  GYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRH 314

Query: 1070 SDGCLLIVQEGGYHVTYSSYCLHATLEGVLNLPHPLLSDPIAYYPEDESFSVQVINSIKQ 1249
            SDG LLIVQEGGYHVTYS+YCLHATLEGVLNLP PLL DP+AYYPED++FSV+VI +++ 
Sbjct: 315  SDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQN 374

Query: 1250 YQKD 1261
            Y  D
Sbjct: 375  YVTD 378


>ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi|222849887|gb|EEE87434.1|
            histone deacetylase [Populus trichocarpa]
          Length = 379

 Score =  597 bits (1538), Expect = e-168
 Identities = 278/369 (75%), Positives = 318/369 (86%), Gaps = 1/369 (0%)
 Frame = +2

Query: 176  IHVFWHEGMLNHETGTGVFDTGFDPGFLDILEKHPENSDRIKNMVSILKRGPISPFISWH 355
            I VFWHEGMLNHETG GVFD+G DPGFLD+LEKHPENSDRIKNMVSIL++GPISP+ISW 
Sbjct: 10   IDVFWHEGMLNHETGKGVFDSGTDPGFLDVLEKHPENSDRIKNMVSILQKGPISPYISWQ 69

Query: 356  SGRPALISELQTFHTQDYINELTGADRIGGKVICSGTILNPGSWHXXXXXXXXXXXXMKH 535
             GRPA + EL +FH  +YI+EL  A + GGK+IC+GT LNPGSW             MKH
Sbjct: 70   HGRPAQVPELLSFHAPEYIDELVEAGKQGGKMICAGTFLNPGSWDAALLAAGTTLSAMKH 129

Query: 536  ILDGSGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGCKKVVVVDIDVHYGN 715
            ILDG GKLAYALVRPPGHHAQP QADGYCFLNNAGLAVQLALDSGCKKV V+DIDVHYGN
Sbjct: 130  ILDGHGKLAYALVRPPGHHAQPKQADGYCFLNNAGLAVQLALDSGCKKVTVIDIDVHYGN 189

Query: 716  GTAEGFYGSNKVLTVSLHMNHGSWGPSHPQSGAVDKVGKGEGFGYNMNIPLPNGTGDRGY 895
            GTAEGFY ++KVLTVSLHMNHGSWGPSHPQ+G+V ++G+GEGFGYN+NIPLPNGTGDRGY
Sbjct: 190  GTAEGFYRTDKVLTVSLHMNHGSWGPSHPQNGSVGELGEGEGFGYNLNIPLPNGTGDRGY 249

Query: 896  KYAMTELIVPAVQKFEPDMMVLVVGQDSCAFDPNGRQCLTMEGYREIGQIIRSLADKHSD 1075
             YAM +L+VPAV KFEPDM+V VVGQDS AFDPNGRQCLTM+GYREIG+I+ SLA+KHS 
Sbjct: 250  GYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFDPNGRQCLTMDGYREIGRIVHSLANKHSG 309

Query: 1076 GCLLIVQEGGYHVTYSSYCLHATLEGVLNLPHPLLSDPIAYYPEDESFSVQVINSIKQYQ 1255
            G +LIVQEGGYH+TYS+YCLHA LEGVL+LP PLL DPIAYYPEDE+F+V+ + + + Y 
Sbjct: 310  GKILIVQEGGYHITYSAYCLHAILEGVLDLPQPLLCDPIAYYPEDEAFAVKFVEATRNYH 369

Query: 1256 KD-VPLLEG 1279
            K+ VP L+G
Sbjct: 370  KEMVPFLKG 378


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