BLASTX nr result
ID: Panax21_contig00033933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00033933
(578 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera] 284 9e-75
emb|CBI30318.3| unnamed protein product [Vitis vinifera] 283 1e-74
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi... 283 1e-74
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi... 279 2e-73
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2... 263 1e-68
>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 284 bits (726), Expect = 9e-75
Identities = 139/191 (72%), Positives = 154/191 (80%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
A LGACR H QPQN GHY+LLSNIYA AGRW+DVAKIR+LM+ RR
Sbjct: 1111 AFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRR 1170
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK+PGWTWIEV+NK+++FS GD THP+SKEIY+ L SL +LEL GYVPDTNFVLHDVD
Sbjct: 1171 LKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVD 1230
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLRVCGDCHTFSKFVSAITRRVIIVR 540
EELK+ LY+HSEKLAIAFGLI+TPE TPIRI KNLRVCGDCHTF K VSAIT RVIIVR
Sbjct: 1231 EELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVR 1290
Query: 541 DAYRSHHCKEG 573
DA R HH KEG
Sbjct: 1291 DANRFHHFKEG 1301
Score = 225 bits (574), Expect = 4e-57
Identities = 110/157 (70%), Positives = 123/157 (78%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
A LGACR H Q QN GHYVLLSNIYA AGRW+DVAKIR+LM+ RR
Sbjct: 435 AFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRR 494
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK PGWTWIEV+NK+++FS GD THP+SKEIY+ L SL +LEL GYVPDTNFVLHDVD
Sbjct: 495 LKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVD 554
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLR 471
EELK+ LY+HSEKLAIAFGLI+TPE TPIRI KNLR
Sbjct: 555 EELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 283 bits (724), Expect = 1e-74
Identities = 138/191 (72%), Positives = 152/191 (79%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
A LGACR H QPQN GHY+LLSNIYA AGRW+DVAK R+LM+ RR
Sbjct: 663 AFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRR 722
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK+PGWTWIEV+NK+++FS GD THP+SKEIY+ L SL +LEL GYVPDTNFVLHDVD
Sbjct: 723 LKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVD 782
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLRVCGDCHTFSKFVSAITRRVIIVR 540
EELK+ LYSHSEKLAIAFGLI+TPE TPIRI KNLRVCGDCHTF K VSAIT RVIIVR
Sbjct: 783 EELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVR 842
Query: 541 DAYRSHHCKEG 573
DA R HH KEG
Sbjct: 843 DANRFHHFKEG 853
>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
[Vitis vinifera]
Length = 705
Score = 283 bits (724), Expect = 1e-74
Identities = 138/191 (72%), Positives = 152/191 (79%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
A LGACR H QPQN GHY+LLSNIYA AGRW+DVAK R+LM+ RR
Sbjct: 507 AFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRR 566
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK+PGWTWIEV+NK+++FS GD THP+SKEIY+ L SL +LEL GYVPDTNFVLHDVD
Sbjct: 567 LKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVD 626
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLRVCGDCHTFSKFVSAITRRVIIVR 540
EELK+ LYSHSEKLAIAFGLI+TPE TPIRI KNLRVCGDCHTF K VSAIT RVIIVR
Sbjct: 627 EELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVR 686
Query: 541 DAYRSHHCKEG 573
DA R HH KEG
Sbjct: 687 DANRFHHFKEG 697
>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 279 bits (714), Expect = 2e-73
Identities = 133/191 (69%), Positives = 155/191 (81%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
ALLGACRIH QPQN GHYVLLSNIYAKAG+W+ VAK R++MT R+
Sbjct: 375 ALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRK 434
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK+PGWTWIEV+NKTY+FS GD +HPQSKEIY+ L+SL K+LE+AGYVPDT+FVL DV+
Sbjct: 435 LKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVE 494
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLRVCGDCHTFSKFVSAITRRVIIVR 540
EE+K + LY+HSEKLAIAFGLI+ PEG PIRI+KNLRVCGDCHTFSK VS+I RR IIVR
Sbjct: 495 EEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVR 554
Query: 541 DAYRSHHCKEG 573
DA R HH +G
Sbjct: 555 DANRFHHFNDG 565
>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 263 bits (673), Expect = 1e-68
Identities = 130/191 (68%), Positives = 148/191 (77%)
Frame = +1
Query: 1 ALLGACRIHGHTXXXXXXXXXXXXXQPQNSGHYVLLSNIYAKAGRWDDVAKIRELMTHRR 180
A LGACRIH Q QN GHY+LLSNIYA AGRW DVAKIR LM RR
Sbjct: 376 AFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRR 435
Query: 181 LKKVPGWTWIEVENKTYKFSTGDHTHPQSKEIYQKLVSLRKELELAGYVPDTNFVLHDVD 360
LKK+PG+TWIEV+N Y+F GD++H +S EIY+ L SL ++LE AGYVPDTN VLHDVD
Sbjct: 436 LKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVD 495
Query: 361 EELKLDSLYSHSEKLAIAFGLISTPEGTPIRITKNLRVCGDCHTFSKFVSAITRRVIIVR 540
EE+KL L++HSEKLAIAFGLI+TP+GTPIRITKNLRVCGDCH+F K VSAIT+R IIVR
Sbjct: 496 EEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVR 555
Query: 541 DAYRSHHCKEG 573
DA R HH KEG
Sbjct: 556 DANRFHHFKEG 566