BLASTX nr result

ID: Panax21_contig00033929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033929
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   588   e-166
ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   583   e-164
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   561   e-158
ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|2...   557   e-156
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   554   e-155

>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  588 bits (1517), Expect = e-166
 Identities = 281/362 (77%), Positives = 312/362 (86%)
 Frame = -1

Query: 1100 MRTRRGICYPKFNMCSKEIHAVKRRRRREFAGEDTTNCRKSRKPSPAKIAQCDFFDNLPD 921
            MRTRRG+CY + +MC+     VKRR   +F+G++   CRK ++ +P    + DFF+ LPD
Sbjct: 1    MRTRRGVCYREVDMCTDN-RVVKRRG--DFSGDNVVCCRKRQRLAPESAGKSDFFEALPD 57

Query: 920  DLVVSILCKLSSSAGCPADFTSVLMTCKRLNGLGLRSIVLSKASQKIFGVKAQKWSDSAH 741
            DLV+ IL KLSSSAGCP+DF +VL+TCKR NGLGL S+VLS+AS K   V+A+ WS+SA 
Sbjct: 58   DLVICILSKLSSSAGCPSDFINVLLTCKRFNGLGLHSLVLSRASSKSLAVRAKNWSESAL 117

Query: 740  RFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSG 561
            RFLK CADAGNVEACYTLGMIRFYCLQNR SGASLMAKAAISSHAPALYSLAVIQFNGS 
Sbjct: 118  RFLKLCADAGNVEACYTLGMIRFYCLQNRVSGASLMAKAAISSHAPALYSLAVIQFNGSV 177

Query: 560  GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELA 381
            GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELA
Sbjct: 178  GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELA 237

Query: 380  AVLSTTPAAITSNSWLTWNPLPHHRHVVGTGCPLLSDFGCNVPVPEAHPASQFLTDWFAG 201
            AVLS+  +A++S SWLTWNP  HHRHV G+GCPLLSDFGCNVP PEAHPAS+FL +WFA 
Sbjct: 238  AVLSSASSAVSSRSWLTWNPHQHHRHVTGSGCPLLSDFGCNVPAPEAHPASRFLAEWFAA 297

Query: 200  RSGIPGPGLRLCSHVGCGRPETRRHEFRRCSVCGGVNYCSRACQALDWKMRHKAECAPAE 21
            R G+PGPGLRLCSH GCGRPE RRHEFRRCSVCG VNYCSRACQALDWK+RHKA CAP E
Sbjct: 298  RGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSVCGIVNYCSRACQALDWKLRHKAACAPVE 357

Query: 20   RW 15
            RW
Sbjct: 358  RW 359


>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
            gi|223545966|gb|EEF47469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  583 bits (1502), Expect = e-164
 Identities = 285/375 (76%), Positives = 309/375 (82%), Gaps = 9/375 (2%)
 Frame = -1

Query: 1100 MRTRRGICYPKFNMCSKEIHAVKRRRRREFAGEDTTN-----CRKSRKPSPAKIA--QCD 942
            M+TRRG+CYP+ +    +   VKRR+  E     T       CRK ++ SP KIA  + D
Sbjct: 1    MKTRRGLCYPRTDALDLDKRLVKRRKLGEIIAAATATGEQMVCRKRQRLSPEKIAGDKTD 60

Query: 941  FFDNLPDDLVVSILCKLSSSAGCPADFTSVLMTCKRLNGLGLRSIVLSKASQKIFGVKAQ 762
            FF  LPDDLV  ILCKLSSSA CP+DF +VL TCKRLNGLGL SIVLSKAS K F +KA+
Sbjct: 61   FFYALPDDLVTCILCKLSSSASCPSDFVNVLATCKRLNGLGLNSIVLSKASPKTFALKAK 120

Query: 761  KWSDSAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAV 582
             WSDSAHRFLK CADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAV
Sbjct: 121  NWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAV 180

Query: 581  IQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQ 402
            IQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+AEGRRFLVQ
Sbjct: 181  IQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQ 240

Query: 401  ANARELAAVLSTTPAAITSNSWLTWNPLPH--HRHVVGTGCPLLSDFGCNVPVPEAHPAS 228
            ANARELAAVLS   + + + +W+ WNP  H  HRH  G GCPLLSDFGCNVP PEAHPAS
Sbjct: 241  ANARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRHASGPGCPLLSDFGCNVPAPEAHPAS 300

Query: 227  QFLTDWFAGRSGIPGPGLRLCSHVGCGRPETRRHEFRRCSVCGGVNYCSRACQALDWKMR 48
            +F+ DWFA R G PG GLRLCSHVGCGRPETR+HEFRRCSVCG VNYCSRACQALDWK+R
Sbjct: 301  RFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLR 360

Query: 47   HKAECAPAERWQDEE 3
            HK ECAP ERW  E+
Sbjct: 361  HKEECAPVERWVVED 375


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  561 bits (1447), Expect = e-158
 Identities = 278/381 (72%), Positives = 308/381 (80%), Gaps = 15/381 (3%)
 Frame = -1

Query: 1100 MRTRRGICYPK----FNMCS-----KEIHAVKRRRRREFAGEDTTNCRK-SRKPSPAKIA 951
            MRTRRGI YP+     N C+     +       R + +F   +   CRK +R  S  K  
Sbjct: 1    MRTRRGISYPRRGVAVNACNTAAEKRTSSTTYNRGKPDFTAGEYMVCRKRNRLVSTGKKG 60

Query: 950  QCDFFDNLPDDLVVSILCKLSSSAGCPADFTSVLMTCKRLNGLGLRSIVLSKASQKIFGV 771
            + D F++LPDDLV+SILCKLSSSA CP+DF +VL+TC+RLNGLGL S+VLSKAS K F +
Sbjct: 61   ETDLFESLPDDLVISILCKLSSSASCPSDFINVLITCRRLNGLGLHSLVLSKASPKSFAI 120

Query: 770  KAQKWSDSAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYS 591
            KA  WSDSAHRFLK CADAGN EACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYS
Sbjct: 121  KANNWSDSAHRFLKLCADAGNAEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYS 180

Query: 590  LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRF 411
            LAVIQFNGSGGSK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRRF
Sbjct: 181  LAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRF 240

Query: 410  LVQANARELAAVLSTTPAAITSNSWLTWNP--LPHHRHVV---GTGCPLLSDFGCNVPVP 246
            LVQANARELAAVLS   + + + +WLTWNP   P+HRH      +GCPLLSDFGCNVP P
Sbjct: 241  LVQANARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSENGPSGCPLLSDFGCNVPAP 300

Query: 245  EAHPASQFLTDWFAGRSGIPGPGLRLCSHVGCGRPETRRHEFRRCSVCGGVNYCSRACQA 66
            EAHPAS+F+T+WFA R G  G GLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQA
Sbjct: 301  EAHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEFRRCSVCGAVNYCSRACQA 360

Query: 65   LDWKMRHKAECAPAERWQDEE 3
            LDWK+RHK ECAP ERW DE+
Sbjct: 361  LDWKLRHKEECAPVERWVDED 381


>ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|222842112|gb|EEE79659.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  557 bits (1435), Expect = e-156
 Identities = 278/380 (73%), Positives = 307/380 (80%), Gaps = 14/380 (3%)
 Frame = -1

Query: 1100 MRTRRGICYPK---FNMCS-----KEIHAVKRRRRREFAGEDTTNCRK-SRKPSPAKIAQ 948
            MRTRRG+ YP+    N C      +      +R R +FA  D   CRK +R  S  K  +
Sbjct: 1    MRTRRGLSYPRGAAVNACDTAAGKRTATTSYKRERPDFAAGDYLVCRKKNRLISTQKTGE 60

Query: 947  CDFFDNLPDDLVVSILCKLSSSAGCPADFTSVLMTCKRLNGLGLRSIVLSKASQKIFGVK 768
             D FD+LPDDLV+SILCKLSSSA CP+DF +VL+TCKRLNGLGL S+VLSKAS K F VK
Sbjct: 61   TDLFDSLPDDLVISILCKLSSSASCPSDFINVLLTCKRLNGLGLHSLVLSKASPKTFAVK 120

Query: 767  AQKWSDSAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSL 588
            A+ WSDSAHRFLK  ADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISS+APALYSL
Sbjct: 121  AKNWSDSAHRFLKLFADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSYAPALYSL 180

Query: 587  AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFL 408
            AVIQFNGSGGSK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRRFL
Sbjct: 181  AVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFL 240

Query: 407  VQANARELAAVLSTTPAAITSNSWLTWNP--LPHHRHVVG---TGCPLLSDFGCNVPVPE 243
            VQANARELAAVLS   +   + +W +WNP   P+HRH  G   +GCPLLSDFGCNVP PE
Sbjct: 241  VQANARELAAVLSKHNSGFPTRTWFSWNPHAHPNHRHPTGNGPSGCPLLSDFGCNVPAPE 300

Query: 242  AHPASQFLTDWFAGRSGIPGPGLRLCSHVGCGRPETRRHEFRRCSVCGGVNYCSRACQAL 63
            +HPAS+F+T+WFA R G  G GLRLCSH GCGR ETR+HEFRRCSVCG VNYCSRACQAL
Sbjct: 301  SHPASRFMTEWFAIRGGSSGSGLRLCSHTGCGRSETRKHEFRRCSVCGAVNYCSRACQAL 360

Query: 62   DWKMRHKAECAPAERWQDEE 3
            DWK+RHK  CAP ERW DE+
Sbjct: 361  DWKLRHKEGCAPVERWVDED 380


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
            gi|449494931|ref|XP_004159686.1| PREDICTED: F-box protein
            At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  554 bits (1428), Expect = e-155
 Identities = 271/369 (73%), Positives = 300/369 (81%), Gaps = 4/369 (1%)
 Frame = -1

Query: 1100 MRTRRGICYPKFNMCSKEIHAVKRRRRREFAGEDTTNCRKSRKPS-PAKIAQCDFFDNLP 924
            MRTR G+ YP     +    A   R+R+     D   CRK  K S   K    D FD+LP
Sbjct: 1    MRTRTGLSYPPLQPTA---FASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLP 57

Query: 923  DDLVVSILCKLSSSAGCPADFTSVLMTCKRLNGLGLRSIVLSKASQKIFGVKAQKWSDSA 744
            DDLV++IL  LSS+A  P+DF ++L+TCKRLN LGL  +VLS+ASQK F ++A+ W++SA
Sbjct: 58   DDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESA 117

Query: 743  HRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGS 564
            HRFLKQC+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 118  HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGS 177

Query: 563  GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQANAREL 384
            GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+ EGRRFLVQANAREL
Sbjct: 178  GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 237

Query: 383  AAVLSTTPAA--ITSNSWLTWNPL-PHHRHVVGTGCPLLSDFGCNVPVPEAHPASQFLTD 213
            AAVLS+  A+    S S LTWN   PHHRHV G+GCPLLSDFGCN+P PEAHPASQFL +
Sbjct: 238  AAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAE 297

Query: 212  WFAGRSGIPGPGLRLCSHVGCGRPETRRHEFRRCSVCGGVNYCSRACQALDWKMRHKAEC 33
            WF  R G PG GLRLCSHVGCGRPETRRHEFRRCSVCG VNYCSRACQALDWK+RHK +C
Sbjct: 298  WFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDC 357

Query: 32   APAERWQDE 6
            AP ERW D+
Sbjct: 358  APVERWLDD 366


Top