BLASTX nr result

ID: Panax21_contig00033909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033909
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1...   133   1e-29
ref|XP_003551870.1| PREDICTED: cell differentiation protein RCD1...   133   1e-29
ref|XP_002529459.1| Cell differentiation protein rcd1, putative ...   133   1e-29
ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1 homolog [Glycine max]
          Length = 325

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/142 (50%), Positives = 90/142 (63%)
 Frame = -3

Query: 434 AIALLQCLASHPDTKMAFLNVRVPDYLYPFIQTKENGRPFQFLRLTSLGAXXXXXXXXXX 255
           A+ALLQC+ASHPDT+M FLN  +P YLYPF+ T    RPF++LRLTSLG           
Sbjct: 115 ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGV---------- 164

Query: 254 XXXXXXXXXXAALVKNDDPIVPKAVHYFLETEMFPMCLRCIELGDVLSQSVATLIVSKIL 75
                      ALVK DD    + + + L TE+ P+CLR +E+G  LS++VAT IV KIL
Sbjct: 165 ---------IGALVKVDD---TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKIL 212

Query: 74  MQEEGLYYCCTSMERFFAVMRV 9
           + + GL Y CT+ ERFFAV RV
Sbjct: 213 LDDVGLDYICTTAERFFAVGRV 234


>ref|XP_003551870.1| PREDICTED: cell differentiation protein RCD1 homolog [Glycine max]
          Length = 325

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/142 (50%), Positives = 90/142 (63%)
 Frame = -3

Query: 434 AIALLQCLASHPDTKMAFLNVRVPDYLYPFIQTKENGRPFQFLRLTSLGAXXXXXXXXXX 255
           A+ALLQC+ASHPDT+M FLN  +P YLYPF+ T    RPF++LRLTSLG           
Sbjct: 115 ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGV---------- 164

Query: 254 XXXXXXXXXXAALVKNDDPIVPKAVHYFLETEMFPMCLRCIELGDVLSQSVATLIVSKIL 75
                      ALVK DD    + + + L TE+ P+CLR +E+G  LS++VAT IV KIL
Sbjct: 165 ---------IGALVKVDD---TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKIL 212

Query: 74  MQEEGLYYCCTSMERFFAVMRV 9
           + + GL Y CT+ ERFFAV RV
Sbjct: 213 LDDVGLDYICTTAERFFAVGRV 234


>ref|XP_002529459.1| Cell differentiation protein rcd1, putative [Ricinus communis]
           gi|223531075|gb|EEF32925.1| Cell differentiation protein
           rcd1, putative [Ricinus communis]
          Length = 328

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/142 (50%), Positives = 90/142 (63%)
 Frame = -3

Query: 434 AIALLQCLASHPDTKMAFLNVRVPDYLYPFIQTKENGRPFQFLRLTSLGAXXXXXXXXXX 255
           A+ALLQC+ASHPDT+M FLN  +P YLYPF+ T    RPF++LRLTSLG           
Sbjct: 109 ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGV---------- 158

Query: 254 XXXXXXXXXXAALVKNDDPIVPKAVHYFLETEMFPMCLRCIELGDVLSQSVATLIVSKIL 75
                      ALVK DD    + + + L TE+ P+CLR +E+G  LS++VAT IV KIL
Sbjct: 159 ---------IGALVKVDD---TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKIL 206

Query: 74  MQEEGLYYCCTSMERFFAVMRV 9
           + + GL Y CT+ ERFFAV RV
Sbjct: 207 LDDVGLDYICTTAERFFAVGRV 228


>ref|XP_002317325.1| predicted protein [Populus trichocarpa] gi|222860390|gb|EEE97937.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/142 (50%), Positives = 90/142 (63%)
 Frame = -3

Query: 434 AIALLQCLASHPDTKMAFLNVRVPDYLYPFIQTKENGRPFQFLRLTSLGAXXXXXXXXXX 255
           A+ALLQC+ASHPDT+M FLN  +P YLYPF+ T    RPF++LRLTSLG           
Sbjct: 110 ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGV---------- 159

Query: 254 XXXXXXXXXXAALVKNDDPIVPKAVHYFLETEMFPMCLRCIELGDVLSQSVATLIVSKIL 75
                      ALVK DD    + + + L TE+ P+CLR +E+G  LS++VAT IV KIL
Sbjct: 160 ---------IGALVKVDD---TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKIL 207

Query: 74  MQEEGLYYCCTSMERFFAVMRV 9
           + + GL Y CT+ ERFFAV RV
Sbjct: 208 LDDVGLDYICTTAERFFAVGRV 229


>ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|222846102|gb|EEE83649.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/142 (50%), Positives = 90/142 (63%)
 Frame = -3

Query: 434 AIALLQCLASHPDTKMAFLNVRVPDYLYPFIQTKENGRPFQFLRLTSLGAXXXXXXXXXX 255
           A+ALLQC+ASHPDT+M FLN  +P YLYPF+ T    RPF++LRLTSLG           
Sbjct: 112 ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGV---------- 161

Query: 254 XXXXXXXXXXAALVKNDDPIVPKAVHYFLETEMFPMCLRCIELGDVLSQSVATLIVSKIL 75
                      ALVK DD    + + + L TE+ P+CLR +E+G  LS++VAT IV KIL
Sbjct: 162 ---------IGALVKVDD---TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKIL 209

Query: 74  MQEEGLYYCCTSMERFFAVMRV 9
           + + GL Y CT+ ERFFAV RV
Sbjct: 210 LDDVGLDYICTTAERFFAVGRV 231


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