BLASTX nr result

ID: Panax21_contig00033871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033871
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis...   289   3e-76
ref|XP_002532489.1| protein with unknown function [Ricinus commu...   282   3e-74
ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|2...   274   9e-72
ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [...   268   5e-70
ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana] gi|753335...   266   1e-69

>ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
           gi|297734313|emb|CBI15560.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  289 bits (739), Expect = 3e-76
 Identities = 145/169 (85%), Positives = 158/169 (93%)
 Frame = +2

Query: 2   FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 181
           FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNI+VGDKLIKAQIWDTAGQE
Sbjct: 14  FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTAGQE 73

Query: 182 RFRAITSSYYRGALGALLVYDITRRDTFESLKKWLYELREFGNPEMVVLLIGNKSDLSAQ 361
           RFRAITSSYYRGALGALLVYDITRR TFE+LKKWL ELR+FG P+MV++L+GNKSDL   
Sbjct: 74  RFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNKSDL-GH 132

Query: 362 SRQVGMEDGETLAQLEGLCFMETSAKENLNVEEAFYHMITRIHEITSQK 508
           SR+V  E+G+TLA+ EGLCFMETSA ENLNVEEAF HMIT+IHE+TSQK
Sbjct: 133 SREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQK 181


>ref|XP_002532489.1| protein with unknown function [Ricinus communis]
           gi|223527788|gb|EEF29888.1| protein with unknown
           function [Ricinus communis]
          Length = 222

 Score =  282 bits (721), Expect = 3e-74
 Identities = 144/169 (85%), Positives = 155/169 (91%)
 Frame = +2

Query: 2   FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 181
           FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRV DKLIKAQIWDTAGQE
Sbjct: 13  FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQIWDTAGQE 72

Query: 182 RFRAITSSYYRGALGALLVYDITRRDTFESLKKWLYELREFGNPEMVVLLIGNKSDLSAQ 361
           RFRAITSSYYRGALGALLVYDITRR TF+++KKWL ELRE+GNPEMVV+L GNK DLS  
Sbjct: 73  RFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGNKCDLS-H 131

Query: 362 SRQVGMEDGETLAQLEGLCFMETSAKENLNVEEAFYHMITRIHEITSQK 508
           +R+VG E+G+ LA+ EGLCFMETSA ENLNVEEAF  MIT+IH ITSQK
Sbjct: 132 TREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 180


>ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|222869091|gb|EEF06222.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  274 bits (700), Expect = 9e-72
 Identities = 140/169 (82%), Positives = 154/169 (91%)
 Frame = +2

Query: 2   FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 181
           FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE
Sbjct: 13  FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 72

Query: 182 RFRAITSSYYRGALGALLVYDITRRDTFESLKKWLYELREFGNPEMVVLLIGNKSDLSAQ 361
           RFRAITSSYYRGALGALLVYDITRR TF+++KKWL+ELR+FG+ +MVV+L+GNKSD+S  
Sbjct: 73  RFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGNKSDIS-H 131

Query: 362 SRQVGMEDGETLAQLEGLCFMETSAKENLNVEEAFYHMITRIHEITSQK 508
            R+V  +DG+ LA+ E L FMETSA ENLNVEEAF  MITRIHEI SQK
Sbjct: 132 LREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK 180


>ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
          Length = 218

 Score =  268 bits (685), Expect = 5e-70
 Identities = 131/169 (77%), Positives = 151/169 (89%)
 Frame = +2

Query: 2   FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 181
           FKAVLIGDS VGKSNLLSRF++DEFRLDSKPTIGVEFAYRNI+VGDKLIKAQIWDTAGQE
Sbjct: 13  FKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTAGQE 72

Query: 182 RFRAITSSYYRGALGALLVYDITRRDTFESLKKWLYELREFGNPEMVVLLIGNKSDLSAQ 361
           RFRAITSSYYRGALGA+LVYDI+RR ++E++ KWL ELREFG  +MVV+L+GNK DL  Q
Sbjct: 73  RFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGNKCDLDGQ 132

Query: 362 SRQVGMEDGETLAQLEGLCFMETSAKENLNVEEAFYHMITRIHEITSQK 508
           SR+V  E+G+  A+ EGLCFMETSA +NLNVEE F  MITRI+++TSQK
Sbjct: 133 SREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQK 181


>ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
           gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName:
           Full=Ras-related protein RABA6a; Short=AtRABA6a
           gi|12324223|gb|AAG52089.1|AC012679_27 putative
           ras-related GTP-binding protein; 14977-15931
           [Arabidopsis thaliana] gi|21537030|gb|AAM61371.1|
           putative ras-related GTP-binding protein [Arabidopsis
           thaliana] gi|332197367|gb|AEE35488.1| RAB GTPase A6a
           [Arabidopsis thaliana]
          Length = 233

 Score =  266 bits (681), Expect = 1e-69
 Identities = 132/169 (78%), Positives = 153/169 (90%)
 Frame = +2

Query: 2   FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 181
           FKAVLIGDSAVGKSNLLSRFS+DEFR DSKPTIGVEFAYRN+ VGDK+IKAQIWDTAGQE
Sbjct: 14  FKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQE 73

Query: 182 RFRAITSSYYRGALGALLVYDITRRDTFESLKKWLYELREFGNPEMVVLLIGNKSDLSAQ 361
           RFRAITSSYYRGALGALL+YDITRR TF+++KKWL+ELR+F NPE VV+L+GNKSDL  Q
Sbjct: 74  RFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDL-RQ 132

Query: 362 SRQVGMEDGETLAQLEGLCFMETSAKENLNVEEAFYHMITRIHEITSQK 508
           SR+V  ++G+TLA+ EGL F+ETSA EN+NVEEAF  MI RIHE+ +Q+
Sbjct: 133 SREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181


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