BLASTX nr result

ID: Panax21_contig00033851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033851
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   153   3e-39
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-39
emb|CBI26002.3| unnamed protein product [Vitis vinifera]              153   3e-39
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...   154   1e-38
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   153   3e-37

>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  153 bits (386), Expect(2) = 3e-39
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   KEGEYPGLSQTSIPSSRSNKTPIKNIKKKLDRKNQAKSWANSVTEALSDSINNKQWLQAL 181
           K+GE+PG S       RS KTPIKNIKKKLDRKN AK+WAN+V EALSD +  KQWLQAL
Sbjct: 73  KQGEFPGTSA----EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQAL 128

Query: 182 EVFEMLKEQPFYQPKEGTYMKLIVLLGRSRQPQLAHQLFDTIL 310
           EVFEML+EQPFYQPKEGTYMKL+VLLG+S QP  AH+LFDT++
Sbjct: 129 EVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMV 171



 Score = 33.9 bits (76), Expect(2) = 3e-39
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 316 NLIDEAFSILAQMKTLP 366
           NLIDEAFSIL QMKTLP
Sbjct: 193 NLIDEAFSILNQMKTLP 209


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  153 bits (386), Expect(2) = 3e-39
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   KEGEYPGLSQTSIPSSRSNKTPIKNIKKKLDRKNQAKSWANSVTEALSDSINNKQWLQAL 181
           K+GE+PG S       RS KTPIKNIKKKLDRKN AK+WAN+V EALSD +  KQWLQAL
Sbjct: 73  KQGEFPGTSA----EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQAL 128

Query: 182 EVFEMLKEQPFYQPKEGTYMKLIVLLGRSRQPQLAHQLFDTIL 310
           EVFEML+EQPFYQPKEGTYMKL+VLLG+S QP  AH+LFDT++
Sbjct: 129 EVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMV 171



 Score = 33.9 bits (76), Expect(2) = 3e-39
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 316 NLIDEAFSILAQMKTLP 366
           NLIDEAFSIL QMKTLP
Sbjct: 193 NLIDEAFSILNQMKTLP 209


>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  153 bits (386), Expect(2) = 3e-39
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   KEGEYPGLSQTSIPSSRSNKTPIKNIKKKLDRKNQAKSWANSVTEALSDSINNKQWLQAL 181
           K+GE+PG S       RS KTPIKNIKKKLDRKN AK+WAN+V EALSD +  KQWLQAL
Sbjct: 73  KQGEFPGTSA----EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQAL 128

Query: 182 EVFEMLKEQPFYQPKEGTYMKLIVLLGRSRQPQLAHQLFDTIL 310
           EVFEML+EQPFYQPKEGTYMKL+VLLG+S QP  AH+LFDT++
Sbjct: 129 EVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMV 171



 Score = 33.9 bits (76), Expect(2) = 3e-39
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 316 NLIDEAFSILAQMKTLP 366
           NLIDEAFSIL QMKTLP
Sbjct: 193 NLIDEAFSILNQMKTLP 209


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  154 bits (390), Expect(2) = 1e-38
 Identities = 75/103 (72%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   KEGEYPGLSQTSIPSSRSNKTPIKNIKKKLDRKNQAKSWANSVTEALSDSINNKQWLQAL 181
           K+GE+PG ++TS P     +TPIKNIKKKLDRKN+AK+W N+VTEALSD I  KQW QAL
Sbjct: 59  KQGEFPGFTETSPP----RRTPIKNIKKKLDRKNKAKAWVNTVTEALSDRILKKQWFQAL 114

Query: 182 EVFEMLKEQPFYQPKEGTYMKLIVLLGRSRQPQLAHQLFDTIL 310
           EVFEMLKEQPFY PKEGTYMKL+VLLGR+ QPQ AHQLFD ++
Sbjct: 115 EVFEMLKEQPFYHPKEGTYMKLLVLLGRTGQPQRAHQLFDEMV 157



 Score = 30.4 bits (67), Expect(2) = 1e-38
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 316 NLIDEAFSILAQMKTLP 366
           +L DEAFSIL QMKTLP
Sbjct: 179 HLTDEAFSILQQMKTLP 195


>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510921|gb|AES92063.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  153 bits (387), Expect(2) = 3e-37
 Identities = 73/103 (70%), Positives = 89/103 (86%)
 Frame = +2

Query: 2   KEGEYPGLSQTSIPSSRSNKTPIKNIKKKLDRKNQAKSWANSVTEALSDSINNKQWLQAL 181
           K+GE+PG+S+TS+PSS   K PIKN+KKKLDRKN AK+WAN+VTEALS+ I+ KQWLQAL
Sbjct: 64  KQGEFPGVSETSLPSSTRRK-PIKNVKKKLDRKNNAKAWANTVTEALSECIDKKQWLQAL 122

Query: 182 EVFEMLKEQPFYQPKEGTYMKLIVLLGRSRQPQLAHQLFDTIL 310
           E  +ML+EQ FYQP+EGTYMKLIVLLG+S QPQ AHQLF  ++
Sbjct: 123 ETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMI 165



 Score = 26.6 bits (57), Expect(2) = 3e-37
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 316 NLIDEAFSILAQMKTLPL 369
           N+IDEA SIL +MK  PL
Sbjct: 187 NMIDEALSILDEMKNHPL 204


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