BLASTX nr result
ID: Panax21_contig00033840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00033840
(378 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30
emb|CBI21003.3| unnamed protein product [Vitis vinifera] 135 3e-30
ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|2... 134 1e-29
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,... 129 2e-28
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 135 bits (340), Expect = 3e-30
Identities = 71/126 (56%), Positives = 87/126 (69%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
+VYNSMI+GFR+LNNM+AALV +KKM ++ IPCDL TYTTLIDGL KEG+++ AS
Sbjct: 715 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS----- 769
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
LY EML+KGI PD+I + VLVNGLC+KGQLENARK+ E
Sbjct: 770 ---------------------DLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 808
Query: 361 EMDSKS 378
EMD K+
Sbjct: 809 EMDRKN 814
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/122 (28%), Positives = 62/122 (50%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
+ YNS+++GF N+D+AL ++++M + G+ ++ TYT+LI+G K +I LA
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA------ 663
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
EM KG+ DV Y+ L++G C + +E+A+ +F
Sbjct: 664 --------------------LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 703
Query: 361 EM 366
E+
Sbjct: 704 EL 705
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/123 (28%), Positives = 52/123 (42%)
Frame = +1
Query: 7 YNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXXXX 186
+N++ING + M A K +EG TY +++DG KEG I A
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSA-------- 628
Query: 187 XXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFEEM 366
+Y EM G+ P+V+ YT L+NG C +++ A K +EM
Sbjct: 629 ------------------LAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 367 DSK 375
K
Sbjct: 671 REK 673
>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 135 bits (340), Expect = 3e-30
Identities = 71/126 (56%), Positives = 87/126 (69%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
+VYNSMI+GFR+LNNM+AALV +KKM ++ IPCDL TYTTLIDGL KEG+++ AS
Sbjct: 675 IVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS----- 729
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
LY EML+KGI PD+I + VLVNGLC+KGQLENARK+ E
Sbjct: 730 ---------------------DLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 768
Query: 361 EMDSKS 378
EMD K+
Sbjct: 769 EMDRKN 774
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/122 (28%), Positives = 62/122 (50%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
+ YNS+++GF N+D+AL ++++M + G+ ++ TYT+LI+G K +I LA
Sbjct: 570 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA------ 623
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
EM KG+ DV Y+ L++G C + +E+A+ +F
Sbjct: 624 --------------------LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 663
Query: 361 EM 366
E+
Sbjct: 664 EL 665
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/123 (28%), Positives = 52/123 (42%)
Frame = +1
Query: 7 YNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXXXX 186
+N++ING + M A K +EG TY +++DG KEG I A
Sbjct: 537 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSA-------- 588
Query: 187 XXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFEEM 366
+Y EM G+ P+V+ YT L+NG C +++ A K +EM
Sbjct: 589 ------------------LAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 367 DSK 375
K
Sbjct: 631 REK 633
>ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|222855585|gb|EEE93132.1|
predicted protein [Populus trichocarpa]
Length = 841
Score = 134 bits (336), Expect = 1e-29
Identities = 70/125 (56%), Positives = 85/125 (68%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
VVY+SMI+GFR L NM+AAL LHK+M +EGIPCDL+ YTTLI GL KEGK+L AS
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS----- 733
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
LY EMLAKGI PD+I Y+VL++GLC+KGQLENA+K+ E
Sbjct: 734 ---------------------ELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE 772
Query: 361 EMDSK 375
+MD K
Sbjct: 773 DMDRK 777
Score = 54.7 bits (130), Expect = 8e-06
Identities = 36/122 (29%), Positives = 49/122 (40%)
Frame = +1
Query: 10 NSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXXXXX 189
N +ING + KK+ EG TY +IDG KEG + A
Sbjct: 542 NIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA--------- 592
Query: 190 XXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFEEMD 369
+YTEM G+ P+V YT L+NG C ++ A KV +EM
Sbjct: 593 -----------------LAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK 635
Query: 370 SK 375
+K
Sbjct: 636 NK 637
>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 927
Score = 129 bits (325), Expect = 2e-28
Identities = 68/126 (53%), Positives = 84/126 (66%)
Frame = +1
Query: 1 VVYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXX 180
V+YNS+I+G+RNLNNM+AAL L K+M EGI CDL+TYTTLIDGL KEG+++LA
Sbjct: 699 VIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA------ 752
Query: 181 XXXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFE 360
LY+EM AKGI PD+I YTVL+NGLC KGQLENA+K+
Sbjct: 753 --------------------LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILA 792
Query: 361 EMDSKS 378
EM+ S
Sbjct: 793 EMERDS 798
>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 125 bits (313), Expect = 5e-27
Identities = 62/125 (49%), Positives = 84/125 (67%)
Frame = +1
Query: 4 VYNSMINGFRNLNNMDAALVLHKKMTDEGIPCDLRTYTTLIDGLFKEGKILLASXXXXXX 183
+YNSMI GF+N+NN++ A+ L+KKM +EGIPCDL+TYT+LIDGL K G++L AS
Sbjct: 496 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS------ 549
Query: 184 XXXXXXXXXXXXXXXXXXXXXLYTEMLAKGIRPDVIRYTVLVNGLCSKGQLENARKVFEE 363
++TEML+KGI PD +TVL+NGLC+KGQ ENARK+ E+
Sbjct: 550 --------------------DIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 589
Query: 364 MDSKS 378
M+ K+
Sbjct: 590 MNGKN 594