BLASTX nr result

ID: Panax21_contig00033813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033813
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   226   3e-57
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              226   3e-57
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   216   2e-54
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   207   1e-51
ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...   193   1e-47

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  226 bits (575), Expect = 3e-57
 Identities = 101/164 (61%), Positives = 121/164 (73%), Gaps = 4/164 (2%)
 Frame = -1

Query: 481 KKPFSI-SNSEPAQSSDSQTD---LFVCEICADSKPYSSSFPIEGCTHAYCSDCIQNYVV 314
           +KPF+  S +E  Q S+S+ D    FVCEIC D KP + SF I+GC H+YCSDC+  YV 
Sbjct: 98  RKPFTFPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVA 157

Query: 313 SKLENNITQIRCPDSGCNGLLEPEDCRPILPPQVFDRWGTALSEAVILDYHKFYCPYKDC 134
           SKL++N+++I CP   C G+LEP+ CRPILP  VFDRWG AL EA+IL   KFYCPYKDC
Sbjct: 158 SKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDC 217

Query: 133 SGLLINDTDEIITQPECPNCRRLFCVQCNVPWHEGIECGEFQSL 2
           S LLI D  E+I + ECPNCRRLFC QC VPWH GI+CGEFQ L
Sbjct: 218 SALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKL 261


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  226 bits (575), Expect = 3e-57
 Identities = 101/164 (61%), Positives = 121/164 (73%), Gaps = 4/164 (2%)
 Frame = -1

Query: 481 KKPFSI-SNSEPAQSSDSQTD---LFVCEICADSKPYSSSFPIEGCTHAYCSDCIQNYVV 314
           +KPF+  S +E  Q S+S+ D    FVCEIC D KP + SF I+GC H+YCSDC+  YV 
Sbjct: 98  RKPFTFPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVA 157

Query: 313 SKLENNITQIRCPDSGCNGLLEPEDCRPILPPQVFDRWGTALSEAVILDYHKFYCPYKDC 134
           SKL++N+++I CP   C G+LEP+ CRPILP  VFDRWG AL EA+IL   KFYCPYKDC
Sbjct: 158 SKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDC 217

Query: 133 SGLLINDTDEIITQPECPNCRRLFCVQCNVPWHEGIECGEFQSL 2
           S LLI D  E+I + ECPNCRRLFC QC VPWH GI+CGEFQ L
Sbjct: 218 SALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKL 261


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  216 bits (551), Expect = 2e-54
 Identities = 102/185 (55%), Positives = 124/185 (67%), Gaps = 6/185 (3%)
 Frame = -1

Query: 538 DREIDDVQFLD-----SFTVKNQNKKPFSISNSEPAQSSD-SQTDLFVCEICADSKPYSS 377
           D E DD++ LD     + + K   K  F  S +E   SS+ +    FVCEIC +SK    
Sbjct: 159 DDENDDLRVLDFTPLPATSKKEMGKNRFGFSVTEKGHSSEPNDHPQFVCEICVESKTADE 218

Query: 376 SFPIEGCTHAYCSDCIQNYVVSKLENNITQIRCPDSGCNGLLEPEDCRPILPPQVFDRWG 197
           S  I GCTHAYC+DC+  YV SK++ NIT I CP SGC GLLEPE CR ILP +VFDRWG
Sbjct: 219 SLAIRGCTHAYCTDCMAKYVASKIQENITGIYCPVSGCGGLLEPEYCRSILPQEVFDRWG 278

Query: 196 TALSEAVILDYHKFYCPYKDCSGLLINDTDEIITQPECPNCRRLFCVQCNVPWHEGIECG 17
            AL EA+ L   KFYCP+KDCS +LIND  E+I + ECP+CRRLFC  C VPWH GI+C 
Sbjct: 279 NALCEALNLGSQKFYCPFKDCSAMLINDGGEVIRESECPHCRRLFCAHCKVPWHSGIDCN 338

Query: 16  EFQSL 2
           +FQ+L
Sbjct: 339 KFQTL 343


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  207 bits (527), Expect = 1e-51
 Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 2/181 (1%)
 Frame = -1

Query: 538 DREIDDVQFLDSFTVKNQNKKP-FSISNSEPAQSSDSQTDL-FVCEICADSKPYSSSFPI 365
           D +I  + FL       + K+P F  S +E  QSS+SQ D  FVC+IC +     +SF I
Sbjct: 56  DDDIKVLDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPDFVCQICVEPTILKNSFLI 115

Query: 364 EGCTHAYCSDCIQNYVVSKLENNITQIRCPDSGCNGLLEPEDCRPILPPQVFDRWGTALS 185
           +GCTHAYC++C+  YV SKL+ NIT+I CP   C G LEPEDCR +LP  VFDRWG AL 
Sbjct: 116 KGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNALC 175

Query: 184 EAVILDYHKFYCPYKDCSGLLINDTDEIITQPECPNCRRLFCVQCNVPWHEGIECGEFQS 5
           EAVIL   KFYCP+KDCS +LI+D +E++ + ECPNC R+FC QC VPWH  I C E++ 
Sbjct: 176 EAVILGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCEEYKM 235

Query: 4   L 2
           L
Sbjct: 236 L 236


>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
          Length = 333

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/186 (51%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
 Frame = -1

Query: 556 HEIECPDREIDDVQFLDSFTVKNQNKKPFSISNSEPAQSSDSQTDLFVCEICADSKPYSS 377
           H I   D E DD   + +FT  N +    S  +S   + S+S +  FVCEIC ++K    
Sbjct: 82  HVINLSDTEDDDEVRILNFTPINTSFGKRSKKSSSKGECSNSAS--FVCEICTETKTARD 139

Query: 376 SFPIEGCTHAYCSDCIQNYVVSKLENNITQIRCPDSGCNGLLEPEDCRPILPPQVFDRWG 197
           SF I GC H YC+ C+  YV SKLE NI  I CP  GC GLLE +DCR IL P+VFDRWG
Sbjct: 140 SFSIIGCHHVYCNSCVAQYVESKLEENIVSIPCPVPGCRGLLEADDCREILAPRVFDRWG 199

Query: 196 TALSEAVILDYHKFYCPYKDCSGLLINDTDE-IITQPECPNCRRLFCVQCNVPWHEGIEC 20
            AL EAVI    KFYCP+ DCS +LI   +E  I + ECPNCRRLFC QC VPWH+ + C
Sbjct: 200 KALCEAVIAAEEKFYCPFADCSVMLIRGIEENNIREAECPNCRRLFCAQCRVPWHDNMPC 259

Query: 19  GEFQSL 2
            +FQ L
Sbjct: 260 EDFQKL 265


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