BLASTX nr result

ID: Panax21_contig00033810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033810
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   128   5e-28
ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   122   2e-26
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   122   4e-26
ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855...   114   8e-24

>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/135 (61%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
 Frame = +1

Query: 4   LSKPESRMVLFGSQLKIQIXXXXXXXXXXXXXXXMSPGDFGIKIRNSQLGSFSPLLSPS- 180
           LSKPESRMVLFGSQLKIQI                  GDFGIK RNSQ GSFS  LSPS 
Sbjct: 117 LSKPESRMVLFGSQLKIQIPPLPPPFLSPTDQSPKLNGDFGIKTRNSQFGSFSSGLSPSP 176

Query: 181 -NKSPFXXXXXXXXXXXXXRIF----SAGEMELSENYTCVITHGPNPKTTHIFDDCIIES 345
             KS F             R+F    SA EMELSE+YTCVITHGP PKTTHIFD+CI+ES
Sbjct: 177 VKKSLFGSANSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTTHIFDNCIVES 236

Query: 346 CCGVVGFSASSKKEN 390
           CCG VGFSASS+K+N
Sbjct: 237 CCGAVGFSASSRKDN 251


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  128 bits (321), Expect = 5e-28
 Identities = 79/138 (57%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   KLSKPESRMVLFGSQLKIQIXXXXXXXXXXXXXXXMSPGDFGIKIRNSQLGSFSPLLS-- 174
           KLSKPESRMVLFGSQLKIQI                SP DFGIK RNSQLG FSP LS  
Sbjct: 119 KLSKPESRMVLFGSQLKIQIPPLPSSVLSPAESPK-SPADFGIKTRNSQLGPFSPCLSQS 177

Query: 175 PSNKSPFXXXXXXXXXXXXXRIF----SAGEMELSENYTCVITHGPNPKTTHIFDDCIIE 342
           P+ KS F             RIF    SA EMELSE+YTCVI+HGPNP+TTHIFD+CI  
Sbjct: 178 PAKKSGFGSANSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIFDNCI-- 235

Query: 343 SCCGVVGFSASSKKENGF 396
                VGFSAS K+ + F
Sbjct: 236 -----VGFSASRKENDVF 248


>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
           gi|223543751|gb|EEF45279.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 319

 Score =  122 bits (307), Expect = 2e-26
 Identities = 76/140 (54%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
 Frame = +1

Query: 4   LSKPESRMVLFGSQLKIQIXXXXXXXXXXXXXXXMSPGDFGIKIRNSQLGSFSPLLS--P 177
           LSKPESRMVLFGSQLKIQ+                SP DFGIK R+SQLGS S  LS  P
Sbjct: 118 LSKPESRMVLFGSQLKIQVPPLPVSPTDQSPK---SPADFGIKTRHSQLGSSSSGLSHSP 174

Query: 178 SNKSPFXXXXXXXXXXXXXRIF----SAGEMELSENYTCVITHGPNPKTTHIFDDCIIES 345
             KS                +F    SA EME SE+YTCVI++GPNPKTTHIFDD I+ES
Sbjct: 175 VKKSVCGSANSSIDTSSSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIFDDYIVES 234

Query: 346 CCGVVGFSASSKKENGFAID 405
           CC VV FS S  + NGF  D
Sbjct: 235 CCDVVEFSTSRTQTNGFLGD 254


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
           gi|449492592|ref|XP_004159042.1| PREDICTED:
           uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  122 bits (305), Expect = 4e-26
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
 Frame = +1

Query: 1   KLSKPESRMVLFGSQLKIQIXXXXXXXXXXXXXXXMSPGDFGIKIRNSQLGSFSPL--LS 174
           K SKP++RMV+ GSQLKIQI               +SP +FGIK RNS LGS SP+  LS
Sbjct: 104 KPSKPDTRMVVLGSQLKIQIPPLPPFVSPTDDSP-VSPIEFGIKTRNSHLGSLSPVSSLS 162

Query: 175 PSNKSPFXXXXXXXXXXXXXRIF----SAGEMELSENYTCVITHGPNPKTTHIFDDCIIE 342
           P+ KS F              +F    SAGE+E SE+YTCVI+HGPNPKTTHIF DC+IE
Sbjct: 163 PAKKSAFGSSSSGQETPNSPLVFTGCLSAGEIEQSEDYTCVISHGPNPKTTHIFGDCVIE 222

Query: 343 SCCGVVGFSASSKKENGFAIDQ 408
           S CGV    +  +KENGF  D+
Sbjct: 223 SGCGVY---SPVRKENGFFRDR 241


>ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855273 [Vitis vinifera]
           gi|296085215|emb|CBI28710.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  114 bits (285), Expect = 8e-24
 Identities = 65/124 (52%), Positives = 73/124 (58%)
 Frame = +1

Query: 7   SKPESRMVLFGSQLKIQIXXXXXXXXXXXXXXXMSPGDFGIKIRNSQLGSFSPLLSPSNK 186
           SKP SRMVLFGSQLK+QI                SP DFGIK RNSQL S SP       
Sbjct: 121 SKPNSRMVLFGSQLKVQIPHLQPSALSPAESPK-SPADFGIKTRNSQLASLSP------- 172

Query: 187 SPFXXXXXXXXXXXXXRIFSAGEMELSENYTCVITHGPNPKTTHIFDDCIIESCCGVVGF 366
             F             RIF+   MELSE YTCVI+HGPNP+TTHIFD+CI+ESCCGV   
Sbjct: 173 --FGSLNSGIQTKDSPRIFTG--MELSEEYTCVISHGPNPRTTHIFDNCIVESCCGVSAL 228

Query: 367 SASS 378
           S ++
Sbjct: 229 SQNN 232


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