BLASTX nr result

ID: Panax21_contig00033806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033806
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461...    57   2e-06
emb|CAA44318.1| H1flk [Arabidopsis thaliana]                           57   2e-06
ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|1107422...    57   2e-06
emb|CAA80680.1| H1flk-3 [Arabidopsis thaliana]                         57   2e-06
ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp....    57   2e-06

>gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461) [Arabidopsis
           thaliana] gi|111074216|gb|ABH04481.1| At1g04280
           [Arabidopsis thaliana]
          Length = 480

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -1

Query: 434 VSNLNDEAESIYELYPVATAPTPDELIVGPGSPVWKDIVLIPTRPRLQLDLKIAIQKIE 258
           VS+LN +AESIYELYP      P +L   PGS VW D+VL+P+RP++Q +L  AI++IE
Sbjct: 423 VSSLNPDAESIYELYP-----DPSQLSK-PGS-VWNDVVLVPSRPKVQKELSDAIRRIE 474


>emb|CAA44318.1| H1flk [Arabidopsis thaliana]
          Length = 525

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -1

Query: 434 VSNLNDEAESIYELYPVATAPTPDELIVGPGSPVWKDIVLIPTRPRLQLDLKIAIQKIE 258
           VS+LN +AESIYELYP      P +L   PGS VW D+VL+P+RP++Q +L  AI++IE
Sbjct: 468 VSSLNPDAESIYELYP-----DPSQLSK-PGS-VWNDVVLVPSRPKVQKELSDAIRRIE 519


>ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|110742284|dbj|BAE99067.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332189557|gb|AEE27678.1| protein H1flk [Arabidopsis
           thaliana]
          Length = 534

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -1

Query: 434 VSNLNDEAESIYELYPVATAPTPDELIVGPGSPVWKDIVLIPTRPRLQLDLKIAIQKIE 258
           VS+LN +AESIYELYP      P +L   PGS VW D+VL+P+RP++Q +L  AI++IE
Sbjct: 477 VSSLNPDAESIYELYP-----DPSQLSK-PGS-VWNDVVLVPSRPKVQKELSDAIRRIE 528


>emb|CAA80680.1| H1flk-3 [Arabidopsis thaliana]
          Length = 114

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -1

Query: 434 VSNLNDEAESIYELYPVATAPTPDELIVGPGSPVWKDIVLIPTRPRLQLDLKIAIQKIE 258
           VS+LN +AESIYELYP      P +L   PGS VW D+VL+P+RP++Q +L  AI++IE
Sbjct: 57  VSSLNPDAESIYELYP-----DPSQLSK-PGS-VWNDVVLVPSRPKVQKELSDAIRRIE 108


>ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338047|gb|EFH68464.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = -1

Query: 434 VSNLNDEAESIYELYPVATAPTPDELIVGPGSPVWKDIVLIPTRPRLQLDLKIAIQKIE 258
           VS+LN +AESIYELYP      P +L   PGS VW D+VL+P+RP++Q +L  A+++IE
Sbjct: 422 VSSLNPDAESIYELYP-----DPSQLSK-PGS-VWNDVVLVPSRPKVQKELSDAVRRIE 473


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