BLASTX nr result
ID: Panax21_contig00033775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033775 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 54 5e-12 emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera] 56 2e-11 gb|AFK44938.1| unknown [Lotus japonicus] 54 3e-11 gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 55 1e-10 dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas... 52 1e-10 >emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] Length = 1316 Score = 53.9 bits (128), Expect(2) = 5e-12 Identities = 24/46 (52%), Positives = 31/46 (67%) Frame = -3 Query: 436 AVYEITWMLALLQDFGLKSLTPVTFYCDNKSALHITSNIVFHVRTK 299 A E+TW+ +LL G+ P+ YCDNK+ALHI +N VFH RTK Sbjct: 1213 AASELTWLKSLLASLGVLHDKPMKLYCDNKAALHIAANPVFHERTK 1258 Score = 41.6 bits (96), Expect(2) = 5e-12 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Frame = -2 Query: 305 H*ATDCHLVGKKLIQERVSTAHLPSHLQPADVFTRALSA-----LITELGVHNL 159 H DCH V +K+ + T +LPS LQ AD+FT+AL L ++LG+ +L Sbjct: 1259 HIEIDCHFVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQFLFLSSKLGIRDL 1312 >emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera] Length = 987 Score = 56.2 bits (134), Expect(2) = 2e-11 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = -3 Query: 427 EITWMLALLQDFGLKSLTPVTFYCDNKSALHITSNIVFHVRTK 299 E+TW++ALL+D G+ YCDN++ALHI +N VFH RTK Sbjct: 887 ELTWLIALLKDLGVPHTQXALLYCDNQAALHIVANXVFHERTK 929 Score = 37.4 bits (85), Expect(2) = 2e-11 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Frame = -2 Query: 305 H*ATDCHLVGKKLIQERVSTAHLPSHLQPADVFTRAL-----SALITELGVHNLF 156 H DCH+V +K+ + T H+ S Q AD+ T+ L ++LI ++G++N++ Sbjct: 930 HIEIDCHIVREKIQTGMLKTLHVASQHQLADILTKPLFPDQFNSLIDKMGMYNIY 984 >gb|AFK44938.1| unknown [Lotus japonicus] Length = 107 Score = 53.5 bits (127), Expect(2) = 3e-11 Identities = 21/43 (48%), Positives = 33/43 (76%) Frame = -3 Query: 427 EITWMLALLQDFGLKSLTPVTFYCDNKSALHITSNIVFHVRTK 299 E+ W+ +L D G++ ++P+ +CDN++ALHI+SN VFH RTK Sbjct: 7 ELMWVGQILSDMGIERISPMKLWCDNQAALHISSNPVFHERTK 49 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 5/55 (9%) Frame = -2 Query: 305 H*ATDCHLVGKKLIQERVSTAHLPSHLQPADVFTRALSA-----LITELGVHNLF 156 H DCH + +KL Q +ST+++ + Q ADVFT+AL+ + +LG+ N++ Sbjct: 50 HIEVDCHFIREKLQQNLISTSYVRTGDQHADVFTKALNGVRNDFICNKLGMINIY 104 >gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1501 Score = 55.5 bits (132), Expect(2) = 1e-10 Identities = 23/46 (50%), Positives = 33/46 (71%) Frame = -3 Query: 436 AVYEITWMLALLQDFGLKSLTPVTFYCDNKSALHITSNIVFHVRTK 299 A+ EI W+ LL++ G++ TP YCD+K+A+HI +N VFH RTK Sbjct: 1398 ALKEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTK 1443 Score = 35.4 bits (80), Expect(2) = 1e-10 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = -2 Query: 305 H*ATDCHLVGKKLIQERVSTAHLPSHLQPADVFTRALSA-----LITELGVHNL 159 H +DCH V + ++T H+ + Q ADVFT+AL L+++LGV NL Sbjct: 1444 HIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNL 1497 >dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia x hybrida] Length = 389 Score = 52.0 bits (123), Expect(2) = 1e-10 Identities = 23/45 (51%), Positives = 30/45 (66%) Frame = -3 Query: 433 VYEITWMLALLQDFGLKSLTPVTFYCDNKSALHITSNIVFHVRTK 299 V EI W++ LL D + PV+ +CDN+SA+HI N VFH RTK Sbjct: 284 VAEIAWIVRLLHDLSVDFSLPVSVHCDNQSAIHIAKNPVFHERTK 328 Score = 38.9 bits (89), Expect(2) = 1e-10 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%) Frame = -2 Query: 305 H*ATDCHLVGKKLIQERVSTAHLPSHLQPADVFTRALS-----ALITELGVHNLFQTPNL 141 H DCH V +KL+ +S + +PS Q AD+FT++L+ +L+ +LGV T L Sbjct: 329 HIELDCHFVREKLLDGLISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLGVRKSGST--L 386 Query: 140 RG 135 RG Sbjct: 387 RG 388