BLASTX nr result

ID: Panax21_contig00033774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033774
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription ...    83   2e-14
ref|XP_002519300.1| calmodulin-binding transcription activator (...    63   2e-08
ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis
           vinifera] gi|297736797|emb|CBI25998.3| unnamed protein
           product [Vitis vinifera]
          Length = 1018

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
 Frame = -1

Query: 351 VHRLQNADSEPQLQSPQTDSSPCLEQTNSPEMTTQTSFVY-PNSVDWNRQTLSSEFKDGD 175
           V RL NA    Q+ + Q  S+PCL Q N+P +T Q S+   PN+ DW+ QTLSSEF+DGD
Sbjct: 145 VPRLPNAVPASQIGTIQGSSAPCLSQGNAPTVTGQISYASSPNTADWSGQTLSSEFEDGD 204

Query: 174 SGEVPGISSLVQLLQ----HTPHDPSFHADGI---------TGFPGASFSGVTGSSMWSE 34
           SG+ PG SSL Q +     +    P+  A G          +G  G  FS    +S+  E
Sbjct: 205 SGDDPGTSSLAQPILGSVFYNASLPTHEASGFAGLSRNQLGSGLAGVHFSHGASTSVQDE 264

Query: 33  DHGSSRNI 10
            HGSS ++
Sbjct: 265 IHGSSSSV 272


>ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541615|gb|EEF43164.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 999

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/120 (40%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
 Frame = -1

Query: 327 SEP--QLQSPQTDSSPCLEQTNSPEMTTQTSFVY-PNSVDWNRQTLSSEFKDGDSGEVPG 157
           SEP  Q+ S Q  S+P L QT SP  T QTS+   PN VDWN QTLSSE +D DS +   
Sbjct: 156 SEPSAQVDSSQPSSAPSLAQTASPAFTGQTSYASSPNRVDWNGQTLSSESEDVDSRDNLR 215

Query: 156 ISSLVQLLQHTPHDPSFHADGITGFP------------GASFSGVTGSSMWSEDHGSSRN 13
            S L +     P   S     + GFP            G+ F   T SS+W E   SS++
Sbjct: 216 ASPLTE-----PVYGSLLGTDVEGFPMISRNPPESWFIGSKFGQRTESSLWPEIPSSSKS 270


>ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
 Frame = -1

Query: 330 DSEPQLQSPQTDSSPCLEQTNSPEMTTQTSFVY-PNSVDWNRQTLSSEFKDGDSGEVPGI 154
           DS  Q+++ Q        Q  SP  T QTS+   PN +DWN + LSSEF+D DS   PG 
Sbjct: 136 DSGTQVENLQPSPVTSFAQAASPASTVQTSYASSPNRIDWNGKALSSEFEDVDSRNGPGT 195

Query: 153 SSLVQLLQHT-PHDPSFHADGITGFPGASFSGVTGSSMWSEDHGSSRNISPL 1
           SSL Q +  +  H+ S  +  +     A F   T SS+  E   S R++S L
Sbjct: 196 SSLAQSIHGSMSHNSSLLSPRVE----AKFDLGTQSSLLPEISSSERSVSRL 243


Top