BLASTX nr result

ID: Panax21_contig00033746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033746
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277545.1| PREDICTED: trigger factor isoform 1 [Vitis v...   122   4e-26
ref|XP_003519597.1| PREDICTED: trigger factor-like [Glycine max]      103   1e-20
ref|XP_002321534.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003634717.1| PREDICTED: trigger factor isoform 2 [Vitis v...   103   2e-20
ref|XP_003544759.1| PREDICTED: trigger factor-like [Glycine max]      101   5e-20

>ref|XP_002277545.1| PREDICTED: trigger factor isoform 1 [Vitis vinifera]
           gi|297737496|emb|CBI26697.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score =  122 bits (305), Expect = 4e-26
 Identities = 72/143 (50%), Positives = 88/143 (61%), Gaps = 16/143 (11%)
 Frame = +2

Query: 74  LYFKSTLL---------SPI-------PTLLQPHNTINFKLLSTSHKQSFSSSRQFCLRP 205
           LYF +TLL         SPI       P LLQP         + S+  + S SRQF   P
Sbjct: 3   LYFSTTLLKFRPPLSLLSPITSLSLTTPLLLQPKK-------NPSNLHTLSYSRQF-FHP 54

Query: 206 KHPSSRNTVVXXXXXXXXXXIEAVKDPLPADIQVTETQEPNSRVRLSVEVPPIVCEDCYK 385
           +HPS RN++           + + KD LPAD++VTET+EPNSRVRLSVEVP +VCEDCY+
Sbjct: 55  QHPSHRNSI-HFTAFSSPASVASAKDRLPADVEVTETEEPNSRVRLSVEVPAVVCEDCYQ 113

Query: 386 RVLHEFMKQAKVPGFRAGKKVPE 454
           RV+ EF K AK+PGFR GKKVPE
Sbjct: 114 RVIREFTKLAKIPGFRPGKKVPE 136


>ref|XP_003519597.1| PREDICTED: trigger factor-like [Glycine max]
          Length = 542

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/144 (45%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
 Frame = +2

Query: 35  MELCSCSTTTPNSLYFKSTLLSPIPTLLQPHNTINFKLLSTSHKQSFSSSRQFCLRP--- 205
           MELC   T T  S    +   SP    L+ +      L   S K S  S      +P   
Sbjct: 1   MELC---TRTFTSFLLFNPSFSPNSVFLRANPNATTPLKFNSLKLSSFSPHVHLFQPFLS 57

Query: 206 KHPSSRNTV-VXXXXXXXXXXIEAVKDPLPADIQVTETQEPNSRVRLSVEVPPIVCEDCY 382
            H SS  T+            +   +D LPA+++VTET+EPNSRVRL VEVP +VCEDCY
Sbjct: 58  PHISSPFTLSAAASASSSSVAVGTEQDRLPAELKVTETEEPNSRVRLHVEVPSLVCEDCY 117

Query: 383 KRVLHEFMKQAKVPGFRAGKKVPE 454
           KRV+ EFMKQAK+PGFR GKKVPE
Sbjct: 118 KRVITEFMKQAKIPGFRPGKKVPE 141


>ref|XP_002321534.1| predicted protein [Populus trichocarpa] gi|222868530|gb|EEF05661.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  103 bits (258), Expect = 1e-20
 Identities = 68/145 (46%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
 Frame = +2

Query: 35  MELCSCSTTTP-----NSLYFKSTLLSPIPTLLQPHNTINFKLLSTSHKQSFSSSRQFCL 199
           MEL   ST++      +    K++L   IPTL    +  N K L + ++Q+   S  F  
Sbjct: 1   MELSVSSTSSALLKLNHHFLSKNSLPIKIPTL----HFANDKKLPSFYRQTKRPS--FLR 54

Query: 200 RPKHPSSRNTVVXXXXXXXXXXIEAVKDPLPADIQVTETQEPNSRVRLSVEVPPIVCEDC 379
           +   P+S +  V               D LPADI+VTET EPNSR+RLSVEVPP VCEDC
Sbjct: 55  KFASPASSSIAVGPS-----------NDRLPADIKVTETPEPNSRIRLSVEVPPAVCEDC 103

Query: 380 YKRVLHEFMKQAKVPGFRAGKKVPE 454
           YKRV++EF KQAKVPGFR GK VPE
Sbjct: 104 YKRVMNEFTKQAKVPGFRPGKDVPE 128


>ref|XP_003634717.1| PREDICTED: trigger factor isoform 2 [Vitis vinifera]
          Length = 491

 Score =  103 bits (256), Expect = 2e-20
 Identities = 64/134 (47%), Positives = 79/134 (58%), Gaps = 16/134 (11%)
 Frame = +2

Query: 74  LYFKSTLL---------SPI-------PTLLQPHNTINFKLLSTSHKQSFSSSRQFCLRP 205
           LYF +TLL         SPI       P LLQP         + S+  + S SRQF   P
Sbjct: 3   LYFSTTLLKFRPPLSLLSPITSLSLTTPLLLQPKK-------NPSNLHTLSYSRQF-FHP 54

Query: 206 KHPSSRNTVVXXXXXXXXXXIEAVKDPLPADIQVTETQEPNSRVRLSVEVPPIVCEDCYK 385
           +HPS RN++           + + KD LPAD++VTET+EPNSRVRLSVEVP +VCEDCY+
Sbjct: 55  QHPSHRNSI-HFTAFSSPASVASAKDRLPADVEVTETEEPNSRVRLSVEVPAVVCEDCYQ 113

Query: 386 RVLHEFMKQAKVPG 427
           RV+ EF K AKV G
Sbjct: 114 RVIREFTKLAKVAG 127


>ref|XP_003544759.1| PREDICTED: trigger factor-like [Glycine max]
          Length = 545

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/132 (46%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
 Frame = +2

Query: 80  FKSTLLSPIPT-------LLQPHNTINFKLLSTSHKQSFSSSRQFCLRPKHPSSRNTVVX 238
           F S  LS  P         L PH +  F L + S   S SSS                  
Sbjct: 37  FNSLKLSSFPPHIHLFQPFLSPHTSSPFTLSAASASSSSSSSS----------------- 79

Query: 239 XXXXXXXXXIEAVKDPLPADIQVTETQEPNSRVRLSVEVPPIVCEDCYKRVLHEFMKQAK 418
                    +   +D LPA++ VTET EPNSRVRL VEVP +VCEDCYKRV+ EFMKQAK
Sbjct: 80  -------VAVGTEQDRLPAELNVTETAEPNSRVRLHVEVPSLVCEDCYKRVIAEFMKQAK 132

Query: 419 VPGFRAGKKVPE 454
           +PGFR GKKVPE
Sbjct: 133 IPGFRPGKKVPE 144


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