BLASTX nr result

ID: Panax21_contig00033726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033726
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase...   287   3e-75
gb|AFK34410.1| unknown [Lotus japonicus]                              254   3e-65
gb|AFK37376.1| unknown [Lotus japonicus]                              251   2e-64
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai...   250   3e-64
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin...   248   1e-63

>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Vitis vinifera]
           gi|297735404|emb|CBI17844.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  287 bits (734), Expect = 3e-75
 Identities = 130/152 (85%), Positives = 140/152 (92%)
 Frame = +3

Query: 261 YVGLKPNSSKLFQVKDSVAWNRKTVSNGSKTHCMKTWNPIDNKKFETLSYLPPLSDDSIA 440
           YVGLKP+  KLF  KDSVAW+RKTVSNGSKTHCMKTWNPI+NKKFETLSYLPPLSDDSIA
Sbjct: 15  YVGLKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIA 74

Query: 441 KEIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTLWKLPMFGCTDASQVLHEIQ 620
           KEIDYM+KKGWIPCLEFD +GYV+R+NS+IP YYDGRYWTLWKLPMFGC DASQVL+EI 
Sbjct: 75  KEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRYWTLWKLPMFGCNDASQVLNEIH 134

Query: 621 ECKKTYPKAYIRCLAFDNIKQVQCMSFVIQKP 716
           ECKKTYP AYIRCLAFDN  Q QCM+FVIQKP
Sbjct: 135 ECKKTYPNAYIRCLAFDNEHQGQCMAFVIQKP 166


>gb|AFK34410.1| unknown [Lotus japonicus]
          Length = 173

 Score =  254 bits (648), Expect = 3e-65
 Identities = 112/152 (73%), Positives = 131/152 (86%)
 Frame = +3

Query: 261 YVGLKPNSSKLFQVKDSVAWNRKTVSNGSKTHCMKTWNPIDNKKFETLSYLPPLSDDSIA 440
           +VGLK NSS L+ V     W  KT SNGSKT CMKTWNPI+N+KFETLSYLPPL+D+SIA
Sbjct: 15  FVGLKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFETLSYLPPLTDESIA 74

Query: 441 KEIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTLWKLPMFGCTDASQVLHEIQ 620
           KE+DYM+KKGWIPCLEFD LG++ RENSR+P YYDGRYWTLWKLPMFGC D+SQVL+EIQ
Sbjct: 75  KEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPMFGCNDSSQVLNEIQ 134

Query: 621 ECKKTYPKAYIRCLAFDNIKQVQCMSFVIQKP 716
           ECK+ YP AYIRC+AFDN + +Q M+F+IQKP
Sbjct: 135 ECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKP 166


>gb|AFK37376.1| unknown [Lotus japonicus]
          Length = 173

 Score =  251 bits (641), Expect = 2e-64
 Identities = 111/152 (73%), Positives = 130/152 (85%)
 Frame = +3

Query: 261 YVGLKPNSSKLFQVKDSVAWNRKTVSNGSKTHCMKTWNPIDNKKFETLSYLPPLSDDSIA 440
           +VGLK NSS L+ V     W  KT SNGSKT CMKTWNPI+N+KFETLSYLPPL+D+SIA
Sbjct: 15  FVGLKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFETLSYLPPLTDESIA 74

Query: 441 KEIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTLWKLPMFGCTDASQVLHEIQ 620
           KE+DYM+KKGWIPCLEFD LG++ RENSR+P YYDGRYWTLWKLPMF C D+SQVL+EIQ
Sbjct: 75  KEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPMFDCNDSSQVLNEIQ 134

Query: 621 ECKKTYPKAYIRCLAFDNIKQVQCMSFVIQKP 716
           ECK+ YP AYIRC+AFDN + +Q M+F+IQKP
Sbjct: 135 ECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKP 166


>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355511150|gb|AES92292.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
           gi|388491552|gb|AFK33842.1| unknown [Medicago
           truncatula]
          Length = 173

 Score =  250 bits (639), Expect = 3e-64
 Identities = 114/153 (74%), Positives = 129/153 (84%), Gaps = 1/153 (0%)
 Frame = +3

Query: 261 YVGLKPNSSKLF-QVKDSVAWNRKTVSNGSKTHCMKTWNPIDNKKFETLSYLPPLSDDSI 437
           +VGLK NSS L+     S+ W +KTVSNGSK HCMKTWNPI+NKKFETLSYLPPLSDDSI
Sbjct: 15  FVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKFETLSYLPPLSDDSI 74

Query: 438 AKEIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTLWKLPMFGCTDASQVLHEI 617
           AKEIDYM+KK W PCLEFD  G ++R NS++P YYDGRYWTLWKLPMFGC D+SQVL+EI
Sbjct: 75  AKEIDYMLKKRWTPCLEFDEFGCIHRANSQMPGYYDGRYWTLWKLPMFGCNDSSQVLNEI 134

Query: 618 QECKKTYPKAYIRCLAFDNIKQVQCMSFVIQKP 716
            ECKKTYP AYIRCLAFDN + +Q M+FVI KP
Sbjct: 135 NECKKTYPNAYIRCLAFDNKRHMQAMAFVIHKP 167


>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
           gi|255632934|gb|ACU16821.1| unknown [Glycine max]
          Length = 172

 Score =  248 bits (634), Expect = 1e-63
 Identities = 111/152 (73%), Positives = 127/152 (83%)
 Frame = +3

Query: 261 YVGLKPNSSKLFQVKDSVAWNRKTVSNGSKTHCMKTWNPIDNKKFETLSYLPPLSDDSIA 440
           +VGLK NSS L      + W RK VSNGSKT+CMKTWNPI+NKKFETLSYLPPLSD+SIA
Sbjct: 15  FVGLKSNSSNLCPSTGPIGWKRKIVSNGSKTYCMKTWNPINNKKFETLSYLPPLSDESIA 74

Query: 441 KEIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTLWKLPMFGCTDASQVLHEIQ 620
           KEIDYM+KKGWIPCLEFD LG V RENS +P YYDGRYWTLWKLPMF C+D+SQVL EI 
Sbjct: 75  KEIDYMLKKGWIPCLEFDELGCVRRENSHMPEYYDGRYWTLWKLPMFACSDSSQVLKEIH 134

Query: 621 ECKKTYPKAYIRCLAFDNIKQVQCMSFVIQKP 716
           EC++ YP AYIRCLAFDN + +Q M+F++ KP
Sbjct: 135 ECRRVYPNAYIRCLAFDNQRHMQSMAFIVHKP 166


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