BLASTX nr result

ID: Panax21_contig00033709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033709
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853...   121   2e-38
ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-31
ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|2...   104   2e-30
ref|XP_002514989.1| conserved hypothetical protein [Ricinus comm...   109   1e-29
emb|CBI27559.3| unnamed protein product [Vitis vinifera]              125   5e-27

>ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853782 [Vitis vinifera]
          Length = 359

 Score =  121 bits (304), Expect(2) = 2e-38
 Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = -3

Query: 358 KANGKNRTSQHRTALGKPTPSKWDDAQKWLVILSSGGEKSQKSKTEPRNSNADDRRLIAP 179
           K NG NRT+ HRTALGKPTPSKWDDAQKWLV LS GGEK+Q SKT+PRNSNADDRRLIAP
Sbjct: 30  KGNGTNRTTHHRTALGKPTPSKWDDAQKWLVGLSGGGEKNQ-SKTKPRNSNADDRRLIAP 88

Query: 178 VPKKE-DYSSSEDK 140
           VP+KE DYSS ED+
Sbjct: 89  VPQKEKDYSSCEDE 102



 Score = 62.4 bits (150), Expect(2) = 2e-38
 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = -2

Query: 131 CPGSANTARYEVETKMVDCDESLWRINK-PENSASVVGSICVRD 3
           CPG A++ +Y+VETK VDCDES W+INK  E+S+S V SICVRD
Sbjct: 110 CPGPASSNQYQVETKKVDCDESFWQINKASEDSSSAVRSICVRD 153


>ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|222864665|gb|EEF01796.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  104 bits (260), Expect(2) = 3e-31
 Identities = 53/74 (71%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -3

Query: 358 KANGKNRTSQHRTALGKPTPSKWDDAQKWLVILSSGGEKSQKSKTEPRNSNADDRRLIAP 179
           K NG +R   HRTALGKPTPSKWDDAQKWLV LS GG   +K +++PRNSNADDRRLIAP
Sbjct: 27  KGNGASRGGHHRTALGKPTPSKWDDAQKWLVGLSRGGGGDRK-ESQPRNSNADDRRLIAP 85

Query: 178 VPKKE-DYSSSEDK 140
           VP+ E DYSS ED+
Sbjct: 86  VPQMEHDYSSGEDE 99



 Score = 55.5 bits (132), Expect(2) = 3e-31
 Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
 Frame = -2

Query: 113 TARYEVETKMVDCDESLWRINKP--ENSASVVGSICVRD 3
           T +YEVETK VDCDES+WR+NKP   ++ S V SICVRD
Sbjct: 113 TNQYEVETKKVDCDESVWRVNKPAQNSTMSAVRSICVRD 151


>ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|222852458|gb|EEE90005.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  104 bits (259), Expect(2) = 2e-30
 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -3

Query: 358 KANGKNRTSQHRTALGKPTPSKWDDAQKWLVILSSGGEKSQKSKTEPRNSNADDRRLIAP 179
           K NG +R+  HRTALGKPTPSKWDDAQKWLV LS GG    K +++PRNSNADDRRLIAP
Sbjct: 30  KGNGASRSGHHRTALGKPTPSKWDDAQKWLVGLSRGG-GGDKKESKPRNSNADDRRLIAP 88

Query: 178 VPKKE-DYSSSEDK 140
           VP+ E +YSS ED+
Sbjct: 89  VPQMEQEYSSGEDE 102



 Score = 53.1 bits (126), Expect(2) = 2e-30
 Identities = 24/37 (64%), Positives = 31/37 (83%), Gaps = 2/37 (5%)
 Frame = -2

Query: 107 RYEVETKMVDCDESLWRINKPENSASV--VGSICVRD 3
           +YEVETK VDCDES+WRINKP  ++++  V S+CVRD
Sbjct: 118 QYEVETKNVDCDESVWRINKPAQNSTMNAVRSVCVRD 154


>ref|XP_002514989.1| conserved hypothetical protein [Ricinus communis]
           gi|223546040|gb|EEF47543.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  109 bits (273), Expect(2) = 1e-29
 Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -3

Query: 358 KANGKNRTSQHRTALGKPTPSKWDDAQKWLVILSSGGEKSQKSKTEPRNSNADDRRLIAP 179
           K NG NRTS HRTALGKPTPSKWDDAQKWLV LS GG+K+Q   ++PRNSNADDRRLIAP
Sbjct: 30  KGNGANRTSHHRTALGKPTPSKWDDAQKWLVGLSRGGDKNQ---SKPRNSNADDRRLIAP 86

Query: 178 VPKKE-DYSSSEDKERNAQA 122
           VP++E DY S  D     +A
Sbjct: 87  VPQQERDYLSGGDDVEGEEA 106



 Score = 45.4 bits (106), Expect(2) = 1e-29
 Identities = 22/33 (66%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = -2

Query: 95  ETKMVDCDESLWRINK--PENSASVVGSICVRD 3
           ETK VDCDE +WRINK    ++AS V SICVRD
Sbjct: 114 ETKKVDCDEPIWRINKTVQNSTASAVRSICVRD 146


>emb|CBI27559.3| unnamed protein product [Vitis vinifera]
          Length = 122

 Score =  125 bits (313), Expect = 5e-27
 Identities = 73/117 (62%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -3

Query: 358 KANGKNRTSQHRTALGKPTPSKWDDAQKWLVILSSGGEKSQKSKTEPRNSNADDRRLIAP 179
           K NG NRT+ HRTALGKPTPSKWDDAQKWLV LS GGEK+Q SKT+PRNSNADDRRLIAP
Sbjct: 30  KGNGTNRTTHHRTALGKPTPSKWDDAQKWLVGLSGGGEKNQ-SKTKPRNSNADDRRLIAP 88

Query: 178 VPKKE-DYSSSEDK-ERNAQALQILLDMRWKQRW*TVMNPFGESTNLKIPLQLLDQY 14
           VP+KE DYSS ED+ E  A  LQ                        KIP QLLD Y
Sbjct: 89  VPQKEKDYSSCEDEGEEEANGLQ------------------------KIPHQLLDPY 121


Top