BLASTX nr result

ID: Panax21_contig00033708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033708
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vit...    62   6e-08
ref|XP_002531125.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vitis vinifera]
          Length = 341

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/91 (39%), Positives = 52/91 (57%)
 Frame = +1

Query: 136 NHFNVLPDEILLQIFNKLSDLKALYFCSLVSHRFALIISHVSHVSLIVPHQNPNSTQLXX 315
           +HF+ L DE++  IFNK+ D K+L  CS+VS RFA +I    +VSLIVP  N +  +   
Sbjct: 9   DHFDRLSDELVTLIFNKVLDAKSLCRCSVVSKRFASLIPQTDNVSLIVPSSNNSKPK--- 65

Query: 316 XXXXXXFPKKLLGFLINGVVTKPFKFVRQLV 408
                 F    L +L+   +TKP +F+ Q V
Sbjct: 66  ---RGTFFIVFLKYLVGKFITKPLQFLYQTV 93


>ref|XP_002531125.1| conserved hypothetical protein [Ricinus communis]
           gi|223529289|gb|EEF31259.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/89 (34%), Positives = 47/89 (52%)
 Frame = +1

Query: 127 EEKNHFNVLPDEILLQIFNKLSDLKALYFCSLVSHRFALIISHVSHVSLIVPHQNPNSTQ 306
           E ++ F+ LPD +LL IFNKL D ++L  C LVS RF+ ++    +V L +P   P S  
Sbjct: 10  ENEDFFDPLPDSLLLLIFNKLCDSRSLAQCLLVSKRFSSLVFQADNVFLSIPTPKPKSAS 69

Query: 307 LXXXXXXXXFPKKLLGFLINGVVTKPFKF 393
                      + LL  L++  + KP +F
Sbjct: 70  ----SHRNRASRNLLRTLVHKFIAKPLQF 94


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