BLASTX nr result

ID: Panax21_contig00033701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033701
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331281.1| f-box family protein [Populus trichocarpa] g...   256   1e-66
ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|2...   251   4e-65
ref|XP_002533598.1| ubiquitin-protein ligase, putative [Ricinus ...   251   6e-65
ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15...   246   1e-63
emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]   245   2e-63

>ref|XP_002331281.1| f-box family protein [Populus trichocarpa]
           gi|222873706|gb|EEF10837.1| f-box family protein
           [Populus trichocarpa]
          Length = 452

 Score =  256 bits (655), Expect = 1e-66
 Identities = 117/123 (95%), Positives = 119/123 (96%)
 Frame = +2

Query: 2   MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPQTPQCSVFSLPLKQWYRI 181
           MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNP TPQCSVFSLPLK WYRI
Sbjct: 115 MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPHTPQCSVFSLPLKAWYRI 174

Query: 182 PFTFLPQWAFWLVGSSAGLVCFSGLDGLTFRTLVCNPLTQAWRTLPSMHYNQQRQLIMVV 361
           PFTFLPQWAFWLVGSS GLVCFSGLDGLTF+TLVCNPLTQ WRTLPSMHYNQQRQLIMVV
Sbjct: 175 PFTFLPQWAFWLVGSSGGLVCFSGLDGLTFKTLVCNPLTQTWRTLPSMHYNQQRQLIMVV 234

Query: 362 DRM 370
           DR+
Sbjct: 235 DRI 237


>ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|222873156|gb|EEF10287.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  251 bits (641), Expect = 4e-65
 Identities = 115/123 (93%), Positives = 117/123 (95%)
 Frame = +2

Query: 2   MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPQTPQCSVFSLPLKQWYRI 181
           MIFRLRSVCKRWNSILQDS FLKFHSQVPSHGPCLLTFWKN QTPQCSVFSLPLK WYRI
Sbjct: 115 MIFRLRSVCKRWNSILQDSCFLKFHSQVPSHGPCLLTFWKNLQTPQCSVFSLPLKAWYRI 174

Query: 182 PFTFLPQWAFWLVGSSAGLVCFSGLDGLTFRTLVCNPLTQAWRTLPSMHYNQQRQLIMVV 361
           PFTFLPQWAFWLVGSS GLVCFSGLDGLTF+TLVCNPLTQ WRTLP MHYNQQRQLIMVV
Sbjct: 175 PFTFLPQWAFWLVGSSGGLVCFSGLDGLTFKTLVCNPLTQTWRTLPGMHYNQQRQLIMVV 234

Query: 362 DRM 370
           DR+
Sbjct: 235 DRI 237


>ref|XP_002533598.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223526527|gb|EEF28789.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 435

 Score =  251 bits (640), Expect = 6e-65
 Identities = 114/123 (92%), Positives = 118/123 (95%)
 Frame = +2

Query: 2   MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPQTPQCSVFSLPLKQWYRI 181
           +IFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKN  TPQCSVFSLPLK WYRI
Sbjct: 111 LIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNSLTPQCSVFSLPLKTWYRI 170

Query: 182 PFTFLPQWAFWLVGSSAGLVCFSGLDGLTFRTLVCNPLTQAWRTLPSMHYNQQRQLIMVV 361
           PFTFLPQWAFWLVGSS GLVCFSGLDGLTF+TLVCNPLTQ WRTLP+MHYNQQRQLI+VV
Sbjct: 171 PFTFLPQWAFWLVGSSGGLVCFSGLDGLTFKTLVCNPLTQTWRTLPTMHYNQQRQLILVV 230

Query: 362 DRM 370
           DRM
Sbjct: 231 DRM 233


>ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15710 [Vitis vinifera]
           gi|298204433|emb|CBI16913.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  246 bits (629), Expect = 1e-63
 Identities = 113/122 (92%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPQTPQCSVFSLPLKQWYRI 181
           MIFRLRSVCKRWNSIL DSSFLKFHSQVPSHGPCLLTFWKN QTPQCSVFSLPLK WYRI
Sbjct: 113 MIFRLRSVCKRWNSILLDSSFLKFHSQVPSHGPCLLTFWKNSQTPQCSVFSLPLKTWYRI 172

Query: 182 PFTFLPQWAFWLVGSSAGLVCFSGLDGLTFRTLVCNPLTQAWRTLPSMHYNQQRQLIMVV 361
           PFTFLP WAFWLVGSS GLVCFSGLDGLTF+TLVCNPLTQ W+TLPSMH+NQQRQLIMVV
Sbjct: 173 PFTFLPSWAFWLVGSSGGLVCFSGLDGLTFKTLVCNPLTQRWQTLPSMHHNQQRQLIMVV 232

Query: 362 DR 367
           DR
Sbjct: 233 DR 234


>emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]
          Length = 437

 Score =  245 bits (626), Expect = 2e-63
 Identities = 113/122 (92%), Positives = 115/122 (94%)
 Frame = +2

Query: 2   MIFRLRSVCKRWNSILQDSSFLKFHSQVPSHGPCLLTFWKNPQTPQCSVFSLPLKQWYRI 181
           MIFRLRSVCKRWNSIL DSSFLKFHSQVPSHGPCLLTFWKN QTPQCSVFSLPLK WYRI
Sbjct: 113 MIFRLRSVCKRWNSILLDSSFLKFHSQVPSHGPCLLTFWKNSQTPQCSVFSLPLKTWYRI 172

Query: 182 PFTFLPQWAFWLVGSSAGLVCFSGLDGLTFRTLVCNPLTQAWRTLPSMHYNQQRQLIMVV 361
           PFTFLP WAFWLVGSS GLVCFSGLDGLTF+TLVCNPLTQ W TLPSMH+NQQRQLIMVV
Sbjct: 173 PFTFLPXWAFWLVGSSGGLVCFSGLDGLTFKTLVCNPLTQRWXTLPSMHHNQQRQLIMVV 232

Query: 362 DR 367
           DR
Sbjct: 233 DR 234


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